Table 1.

Summary of hybridization specificities

Strand	Probe type	Hybridization specificity ratiosa	Cvb
			Intra-sample	Inter-sample
Sense	Substitution	2.79	0.31	0.05
	Deletion 1	1.97	0.37	0.14
	Deletion 2	3.26	0.39	0.11
	Insertion	1.68	0.38	0.19
Anti-sense	Substitution	3.29	0.23	0.05
	Deletion 1	2.33	0.26	0.12
	Deletion 2	4.20	0.27	0.11
	Insertion	1.87	0.33	0.18

^aHybridization specificity ratio is defined as the ratio of PM probe hybridization signal to that of the brightest mismatch probe within a given category. The global average of all hybridization specificity ratios for each base in all samples for a given probe type is provided.

^bDetermined for hybridization specificity ratios averaged across windows of 10 bases either within (intra) or across (inter) samples.