Table 4.
Top ten downregulated long noncoding RNAs in WT and HIF-1α-KO mice
| Genes | RPKM in WT mice | RPKM in KO mice | Fold change | P |
|---|---|---|---|---|
| NARF | 1667 | 861 | 0.68 | <0.00001 |
| AP4S1 | 304 | 149 | 0.70 | 0.00028 |
| NT5C1A | 235 | 133 | 0.72 | 0.00024 |
| KCNJ2 | 971 | 553 | 0.75 | 0.00260 |
| MUSK | 413 | 236 | 0.76 | 0.00240 |
| SNAPC1 | 244 | 96 | 0.76 | 0.00370 |
| LRRC2 | 63 | 27 | 0.77 | 0.00290 |
| TIRAP | 786 | 503 | 0.77 | 0.00380 |
| AMYL | 364 | 173 | 0.78 | 0.00820 |
| FZD7 | 940 | 641 | 0.78 | 0.00075 |
NARF: Nuclear prelamin A recognition factor; AP4S1: Adaptor-related protein complex AP-4, sigma 1; NT5C1A: 5’-nucleotidase, cytosolic IA; KCNJ2: Potassium inwardly-rectifying channel, subfamily J, member 2; MUSK: Muscle, skeletal, receptor tyrosine kinase; SNAPC1: Small nuclear RNA-activating complex, polypeptide 1; LRRC2: Leucine-rich repeat containing 2; TIRAP: Toll-interleukin 1 receptor domain-containing adaptor protein; AMYL: Amylase 1, salivary; FZD7: Frizzled class receptor 7; RPKM: Reads Per Kilobase of exon model per million mapped reads; WT: Wild-type; HIF-1α: Hypoxia-inducible factor-1α; KO: Knockout.