. 2017 Jun 19;13(6):e1006710. doi: 10.1371/journal.pgen.1006710

Table 5. Single nucleotide polymorphisms associating with dichotomous tuberculin skin test status below a 5x10^-5 p-value using a dominant genetic model in the Ugandan cohort^* (n = 199).

SNP	Chr.	Minor Allele	MAF	Odds Ratio	95% Confidence Interval	p value	Nearest gene
rs877356	5	T	0.2337	0.171	(0.078, 0.373)	9.18E-06	SLC25A48/IL9
rs654718	11	G	0.2136	0.190	(0.089, 0.406)	1.81E-05	MRE11A
rs7944514	11	C	0.4121	5.284	(2.457, 11.360)	2.03E-05	POLD3
rs7837658	8	T	0.4472	4.842	(2.319, 10.110)	2.67E-05	RNF19A

* adjusted for 10 principal components and sex

Table 5. Single nucleotide polymorphisms associating with dichotomous tuberculin skin test status below a 5x10-5 p-value using a dominant genetic model in the Ugandan cohort* (n = 199).