Fig. 12.

Trait-associated SNPs overlap unannotated lincRNA XLOC_005177 at GWAS loci. Gene annotation, trait-associated SNPs, and LD structure are shown for XLOC_005177. Genes from GENCODE v19 are plotted in each locus. Protein coding genes are shown in blue, unannotated lincRNAs in red, other lincRNAs in green. All other genes, e.g., MIR5702, are shown in black. P value cut-off is corrected for the number of SNPs mapped to lincRNAs. LD heat map color scheme is the default D′/LOD scheme in Haploview.