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. 2017 Jul 3;18:324. doi: 10.1186/s12859-017-1724-7

Table 5.

Filter and assembly statistics for Bignorm with Q 0=20, Diginorm, and the raw datasets (Part II)

Dataset Algorithm N50 Longest contig length Genomic fraction Misassembled contig length
abs % of raw % of Diginorm abs % of raw % of Diginorm abs % of raw % of Diginorm abs % of raw % of Diginorm
Aceto Bignorm 2324 79 105 11,525 98 100 91 97 97 52,487 148 178
Diginorm 2216 76 11,525 98 94 100 29,539 84
Raw 2935 11,772 94 35,351
Alphaproteo Bignorm 11,750 94 115 43,977 91 95 98 101 105 52,001 120 89
Diginorm 10,213 82 46,295 95 93 95 58,184 134
Raw 12,446 48,586 98 43,388
Arco Bignorm 3320 81 97 12,808 57 57 85 100 97 76,797 99 91
Diginorm 3434 84 22,463 100 88 103 84,613 109
Raw 4092 22,439 85 77,888
Arma Bignorm 18,432 102 107 108,140 100 100 98 100 100 774,291 91 103
Diginorm 17,288 96 108,498 100 98 100 748,560 88
Raw 18,039 108,498 98 849,085
ASZN2 Bignorm 19,788 91 88 72,685 71 88 97 99 99 2,753,167 94 105
Diginorm 16,591 76 82687 81 97 100 2,617,095 89
Raw 21,784 102,287 97 2,941,524
Bacteroides Bignorm 3356 68 100 25,300 100 100 95 98 99 70,206 105 112
Diginorm 3356 68 25,300 100 96 99 62,882 94
Raw 4930 25,299 98 66,626
Caldi Bignorm 50,973 82 83 143,346 89 91 100 100 100 573,836 94 68
Diginorm 61,108 98 157,479 98 100 100 839,126 138
Raw 62,429 160,851 100 609,604
Caulo Bignorm 4515 69 95 20,255 100 107 96 98 98 60,362 86 113
Diginorm 4729 72 18,907 93 98 101 53,456 76
Raw 6562 20,255 97 70,161
Chloroflexi Bignorm 13,418 102 109 79,605 102 102 99 100 100 666,519 95 93
Diginorm 12,305 93 78,276 100 100 100 716,473 102
Raw 13,218 78,276 99 703,171
Crenarch Bignorm 6538 77 91 31,401 81 66 97 99 99 484,354 89 95
Diginorm 7148 84 47,803 124 98 100 510,256 94
Raw 8501 38,582 98 544,763
Cyanobact Bignorm 5833 95 99 33,462 98 100 99 101 100 236,391 113 110
Diginorm 5907 96 33,516 98 99 101 214,574 103
Raw 6130 34,300 98 209,269
E. coli Bignorm 112,393 100 100 268,306 94 94 96 100 100 28,966 65 65
Diginorm 112,393 100 285,311 100 96 100 44,465 100
Raw 112,393 285,528 96 44,366
SAR324 Bignorm 135,669 100 114 302,443 100 100 99 100 100 4,259,479 98 100
Diginorm 119,529 88 302,443 100 99 100 4,264,234 98
Raw 136,176 302,442 99 4,342,602