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. 2017 Jul 5;12(7):e0179679. doi: 10.1371/journal.pone.0179679

Table 2. Estimated times of the most recent common ancestors (tMRCAs) of the main clades and credibility intervals (95%HPD), with calendar years, most probable locations, and state posterior probabilities (spp) of the 77 complete genomes of West Nile virus.

NODE CLADE SUBCLADE TMRCA1 YEARS LOCATION SPP3
MEAN CI2 MEAN CI2
ROOT EUROPE 12.78 11–15.06 2002.22 1999.94–2004 HU 0.8
A 8.6 7.3–10 2006.4 2005–2007.7 AT 0.52
AIT 5.86 4.6–7.05 2009.14 2007.95–2010.4 IT 0.84
AIT1 2.91 2.53–3.25 2012.08 2011.75–2012.47 IT 1
AIT2 2.93 2.51–3.33 2012.07 2011.67–2012.49 IT 1
B 7.55 6.15–9.04 2007.45 2005.96–2008.85 HU 0.66

1 tMRCA: Time of the most Recent Common Ancestor

2CI: Credibility interval

3SPP: State posterior probability