Table 1. The six Foc libraries quality of RNA-seq.
| Samplea | Raw Reads | Clean Reads | Clean Bases | Error (%) | Q20 (%) | Q30 (%) | GC Content (%) |
|---|---|---|---|---|---|---|---|
| G_Foc1 | 75163928 | 70921444 | 7.10G | 0.035 | 97.39 | 91.33 | 52.35 |
| G_Foc4 | 67448538 | 62516786 | 6.26G | 0.035 | 97.39 | 91.33 | 52.55 |
| P_Foc1 | 63999398 | 60148382 | 6.02G | 0.035 | 97.37 | 91.28 | 52.79 |
| P_Foc4 | 69432346 | 65433836 | 6.54G | 0.035 | 97.36 | 91.22 | 52.66 |
| FCW_Foc1 | 79810356 | 75082316 | 7.50G | 0.040 | 97.30 | 91.05 | 53.24 |
| BCW_Foc4 | 58060848 | 55168204 | 5.52G | 0.040 | 97.33 | 91.19 | 53.21 |
a
G, glucose; P, pectin; FCW, cell wall of Fengjiao cultivar; BCW, cell wall of Brazil cultivar.