Table 3. The number of DEGs specifically regulated by Foc4 and Foc1 during decomposition of host cell wall polysaccharides, which were known to associated with fungal pathogenicity.
| Gene Function | BCW_Foc4vsG_Foc4 | FCW_Foc1vsG_Foc1 | P_Foc4vsG_Foc4 | P_Foc1vsG_Foc1 | ||||
|---|---|---|---|---|---|---|---|---|
| Upregulation | Downregulation | Upregulation | Downregulation | Upregulation | Downregulation | Upregulation | Downregulation | |
| Effector | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
| SIX protein | 0 | 3 | 0 | 1 | 0 | 2 | 0 | 0 |
| G-protein | 35 | 13 | 2 | 6 | 5 | 3 | 2 | 8 |
| G-β | 28 | 5 | 1 | 2 | 5 | 1 | 0 | 2 |
| G-protein α subunit | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 1 |
| G-protein β/γ-subunit complex binding | 2 | 2 | 0 | 0 | 0 | 1 | 1 | 1 |
| RagA G protein | 5 | 3 | 0 | 0 | 0 | 1 | 1 | 1 |
| G-protein-coupled receptor | 4 | 6 | 0 | 4 | 0 | 0 | 0 | 5 |
| Chitin synthase | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| Cutinase | 0 | 2 | 0 | 3 | 0 | 1 | 0 | 3 |
| Cutinase transcription factor | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| MFS transporter | 18 | 25 | 35 | 20 | 16 | 12 | 9 | 21 |
| ABC transporter | 17 | 15 | 1 | 7 | 1 | 5 | 3 | 7 |
| Zinc finger protein | 46 | 34 | 14 | 19 | 4 | 25 | 9 | 12 |
| Zn(II)2Cys6-type transcription factor | 13 | 38 | 16 | 10 | 6 | 12 | 5 | 28 |
| bZIP transcription factor | 5 | 6 | 4 | 3 | 0 | 5 | 1 | 0 |
| Serine/threonine kinase | 23 | 21 | 7 | 9 | 1 | 8 | 5 | 4 |
| Two-component system | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 |
| Response regulator | 2 | 1 | 2 | 2 | 0 | 1 | 2 | 1 |
| Histidine kinase | 2 | 4 | 2 | 2 | 1 | 1 | 3 | 0 |
| MAPK/MAPKK/MAPKKK | 0 | 4 | 0 | 1 | 0 | 0 | 1 | 0 |
| SNF protein kinase | 6 | 1 | 0 | 1 | 0 | 0 | 2 | 1 |
| Other protein kinase | 43 | 24 | 8 | 21 | 7 | 12 | 9 | 11 |
| F-box protein | 8 | 1 | 1 | 3 | 1 | 4 | 1 | 5 |
| Peroxidase | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Polyketide synthase | 3 | 4 | 1 | 1 | 1 | 4 | 1 | 1 |
| Cytochrome P450 | 2 | 13 | 7 | 4 | 0 | 3 | 1 | 8 |
| No function | 77 | 137 | 46 | 87 | 38 | 64 | 58 | 27 |
BCW, cell wall of Brazil cultivar; FCW, cell wall of Fengjiao cultivar; P, pectin; SIX, secreted in xylem; RagA, Ras-related GTP-binding protein A; MFS, major facilitator superfamily; ABC, ATP-binding cassette; bZIP, basic leucine zipper; MAPK, mitogen-activated protein kinase; SNF, sucrose nonfermenting.