Table 2. Significant pathways (q-value < 0.05) obtained in the nSL analysis for the four populations, according to continent Europe (EU)/Asia (AS) and domestic (DM)/wild (WB) status.
Biological Process | Pathway Name | NCBI ID | Number of Genes | P-Valuea ASDM | q-Value ASDM | P-Valuea ASWB | q-Value ASWB | P-Valuea EUDM | q-Value EUDM | P-Valuea EUWB | q-Value EUWB |
---|---|---|---|---|---|---|---|---|---|---|---|
Behavior/reproduction | Ovarian steroidogenesis | 791446 | 30 | 5e−04 | 0.032 | 0.012 | 1 | 5e−04 | 0.037 | 0.524 | 1 |
Biological regulation | Biological oxidations | 1336802 | 120 | 5e−04 | 0.032 | 0.148 | 1 | 5e−04 | 0.037 | 1 | 1 |
Hormone synthesis | Steroid hormone biosynthesis | 84375 | 32 | 5e−04 | 0.032 | 0.029 | 1 | 5e−04 | 0.037 | 0.457 | 1 |
Immune response | Inflammatory mediator regulation of TRP channels | 948291 | 73 | 5e−04 | 0.032 | 0.259 | 1 | 0.120 | 1.000 | 1 | 1 |
Lipid metabolic process | Arachidonic acid metabolism | 1336691 | 39 | 5e−04 | 0.032 | 5e−04 | 0.110 | 5e−04 | 0.037 | 0.998 | 1 |
Lipid metabolic process | Arachidonic acid metabolism | 84417 | 47 | 5e−04 | 0.032 | 0.041 | 1 | 5e−04 | 0.037 | 0.977 | 1 |
Lipid metabolic process | Linoleic acid metabolism | 84418 | 24 | 5e−04 | 0.032 | 5e−04 | 0.110 | 5e−04 | 0.037 | 0.755 | 1 |
NCBI ID, National Center for Biotechnology Information database identifier; ASDM, Asian domestic; ASWB, Asian wild boar; EUDM, European domestic; EUWB, European wild boar.
P-value obtained from permutations.