Table 5. Number of SNP markers with allele swaps, number of polymorphic markers that became monomorphic and number of markers that were monomorphic and became polymorphic from [parents-C₀] to [C₃–C₄].

Chromosome	Number of Allele Swaps	Number of Polymorphic to Monomorphic	Number of Monomorphic to Polymorphic	Total SNPs with Changes		Total Number of SNPs
				N	%
1	12	124	7	143	0.096	148,745
2	12	105	1	118	0.102	115,152
3	7	97	1	105	0.097	108,195
4	11	64	1	76	0.080	94,716
5	20	166	9	195	0.177	110,303
6	12	91	3	106	0.139	76,450
7	7	90	2	99	0.123	80,514
8	10	86		96	0.118	81,427
9	21	71	2	94	0.130	72,355
10	11	74	3	88	0.131	67,103
Total	123	968	29	1120	0.117	954,960