Table 5. Number of SNP markers with allele swaps, number of polymorphic markers that became monomorphic and number of markers that were monomorphic and became polymorphic from [parents-C0] to [C3–C4].
Chromosome | Number of Allele Swaps | Number of Polymorphic to Monomorphic | Number of Monomorphic to Polymorphic | Total SNPs with Changes | Total Number of SNPs | |
---|---|---|---|---|---|---|
N | % | |||||
1 | 12 | 124 | 7 | 143 | 0.096 | 148,745 |
2 | 12 | 105 | 1 | 118 | 0.102 | 115,152 |
3 | 7 | 97 | 1 | 105 | 0.097 | 108,195 |
4 | 11 | 64 | 1 | 76 | 0.080 | 94,716 |
5 | 20 | 166 | 9 | 195 | 0.177 | 110,303 |
6 | 12 | 91 | 3 | 106 | 0.139 | 76,450 |
7 | 7 | 90 | 2 | 99 | 0.123 | 80,514 |
8 | 10 | 86 | 96 | 0.118 | 81,427 | |
9 | 21 | 71 | 2 | 94 | 0.130 | 72,355 |
10 | 11 | 74 | 3 | 88 | 0.131 | 67,103 |
Total | 123 | 968 | 29 | 1120 | 0.117 | 954,960 |