Table 2. Select genes found to interact with Rv2680. The list of genes was enriched for genes involved in PDIM biosynthesis.
Orf | Name | Mean WT0 | Mean WT32 | Mean KO0 | Mean KO32 | log FC WT | log FC KO | Δlog FC |
---|---|---|---|---|---|---|---|---|
Rv2930 | fadD26 | 70.32 | 72.69 | 16.41 | 1.55 | 0.05 | −3.52 | −3.57 |
Rv2931 | ppsA | 33.89 | 39.57 | 10.65 | 1.13 | 0.14 | −3.27 | −3.41 |
Rv2932 | ppsB | 25.58 | 52.09 | 7.11 | 0.91 | 1.01 | −3.04 | −4.05 |
Rv2933 | ppsC | 29.53 | 45.06 | 8.52 | 1.30 | 0.56 | −2.76 | −3.33 |
Rv2934 | ppsD | 27.12 | 49.26 | 10.47 | 1.47 | 0.84 | −2.86 | −3.69 |
Rv2935 | ppsE | 34.91 | 55.8 | 9.16 | 1.53 | 0.66 | −2.62 | −3.28 |
Rv2939 | papA5 | 47.09 | 90.11 | 12.44 | 2.07 | 0.88 | −2.65 | −3.53 |
Rv2940c | mas | 56.87 | 97.06 | 25.5 | 3.34 | 0.76 | −2.94 | −3.70 |
Rv2941 | fadD28 | 31.62 | 57.84 | 16.49 | 2.82 | 0.85 | −2.55 | −3.40 |