Table 2.

Characteristics of the 18 SNPs included in the analysis and their previously reported best hits

SNP	Previously published best hit1	Chromosome band	Position	Reference allele(s)	Tested allele2	Tested allele frequency3
rs587221706		1p34.3	38096421	G	C	0.15
rs1006969013		5p15.33	1279790	C	T	0.35
chr10:21878831:D	rs12431809	10p12.31	21878831	CCCTTC	–	0.14
rs173298826		4q26	119949960	A	C	0.15
rs1879586	rs1294266612	17q21.31	43567337	C	G	0.08
rs563180086		1p36	22470407	C	T	0.20
rs4808075	rs23639567	19p13.11	17390291	T	C	0.16
chr9:136138765:D6		9q34.2	136138765	CGCCCACCACTA	–	0.13
rs7207826	rs93035429	17q21.32	46500673	T	C	0.31
rs76837345	rs117826529	8q21.13	82668818	A	G	0.04
rs62274042	rs76514469	3q25.31	156435952	G	A	0.01
rs6356346		9q34.2	136155000	C	T	0.14
rs374476310		17q12	36090885	G	A	0.69
chr17:29181220:I6		17q11.2	29181220	–	T	0.13
rs6755777	rs20725908	2q31.1	177043226	T	G	0.82
rs117224476	rs381411311	9q22.2	16907967	T	G	0.16
rs1400482	rs100882188	8q24.21	129541931	G	A	0.09
rs1161331106		6q22.1	28480635	T	C	0.46

Note: chr10:21878831:D and chr17:29181220:I are listed as rs1449962376 and rs199661266, respectively, in 1000 Genomes. Footnotes next to the SNPs correspond to their published references.

¹If not specified, the previously published best hit is the same as the current best hit considered.

²– Refers to a deletion.

³Based on 1000 Genomes for all populations. For chr9:136138765:D (rs587729126), the tested allele frequency was based on the controls in the full OCAC dataset since the SNP is not listed in 1000 Genomes.