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. 2017 Jul 6;17:113. doi: 10.1186/s12870-017-1065-8

Table 2.

The TEs around the WOX gene locus

Type Number of elments Length occupied Percentage of sequence (%) Number of elments Length occupied Percentage of sequence (%)
10,000 bp region 2000 bp region
DNA transposons 5 1264 bp 0.16 0 0 bp 0.00
CMC-EnSpm 5 1264 bp 0.16 0 0 bp 0.00
MULE-MuDR 0 0 bp 0.00 0 0 bp 0.00
PIF-Harbinger 0 0 bp 0.00 0 0 bp 0.00
TcMar-Pogo 0 0 bp 0.00 0 0 bp 0.00
hAT 0 0 bp 0.00 0 0 bp 0.00
hAT-Ac 0 0 bp 0.00 0 0 bp 0.00
hAT-Charlie 0 0 bp 0.00 0 0 bp 0.00
hAT-Tag1 0 0 bp 0.00 0 0 bp 0.00
hAT-Tip100 0 0 bp 0.00 0 0 bp 0.00
Retroelements 31 15,657 bp 1.92 2 1400 bp 0.69
LINE: 5 1501 bp 0.18 1 373 bp 0.18
L1 5 1501 bp 0.18 1 373 bp 0.18
LTR: 26 14,156 bp 1.74 1 1027 bp 0.51
Caulimovirus 1 126 bp 0.02 0 0 bp 0
Copia 13 8097 bp 0.99 1 1027 bp 0.51
Gypsy 12 5933 bp 0.73 0 0 bp 0.00
RC: 0 0 bp 0.00 0 0 bp 0.00
Helitron 0 0 bp 0.00 0 0 bp 0.00
Low_complexity 6 257 0.03 0 0 bp 0.00
Simple_repeat 559 23,669 2.91 173 6793 3.35
Unspecified 68 24,602 3.02 7 1825 0.90