Table 2. Detection of spotted fever group of Rickettsia and quantification of R. amblyommii in ticks from livestock.
Host | Identified tick species | SFGR (ompA) | GenBank ompA Acc # |
% Nucleotide identity | R. amblyommii copies/μL (ompB qPCR) |
---|---|---|---|---|---|
Buffalo | Hyalomma anatolicum | Candidatus R. amblyommii |
JX441091 JX441092 JX441095 JX441115 |
100 |
40–10497 |
Cattle | Hyalomma anatolicum | Candidatus R. amblyommii |
JX441098 JX441099 |
100 | 11406- 11095 |
RE H. anatolicum | JX441100 | - | |||
Rhipicephalus microplus | Candidatus R. amblyommii |
JX441089 JX441093 |
100 | 45–74 |
|
RE R. microplus |
JX441090 JX441094 |
ΔNA | - | ||
Sheep | Hyalomma anatolicum | Candidatus R. amblyommii |
JX441105 JX441106 JX441107 JX441108 |
99–100 |
54–4766 |
Rhipicephalus microplus |
RE R. microplus |
JX441096 JX441097 |
ΔNA | - | |
Goat | Hyalomma anatolicum | Candidatus R. amblyommii |
JX441109 JX441110 |
100 | 2609–10497 |
Hyalomma dromoderii |
RE H. dromedarii | KC245100 | ΔNA | - | |
Candidatus R. amblyommii |
JX441114 JX441111 JX441112 |
99–100 | 43–7373 | ||
Rhipicephalus microplus |
RE R. microplus | JX441116 | ΔNA | - | |
Donkey | Hyalomma anatolicum | Candidatus R. amblyommii |
JX441101 JX441102 |
99–100 | 3793–5668 |
Camel | Hyalomma anatolicum | Candidatus R. amblyommii | JX441103 | 99 | 5108 |
Hyalomma dromoderii |
Candidatus R. amblyommii | JX441113 | 100 | 61 | |
RE H. dromedarii |
JX441104 KC245101 |
ΔNA | - |
ΔNA indicates–identified in this study