Table 2.
Species | Divergence time (MYA)b | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
PG | PQ | PJ | PV | PN | AU | AE | Esen | ES | DM | ||
Average Ks a | PG | 0.72 | 3.41 | 3.30 | 3.05 | 8.41 | 8.28 | 8.70 | 9.37 | 8.27 | |
PQ | 0.0014 | 3.30 | 3.18 | 2.93 | 8.28 | 8.15 | 8.57 | 9.32 | 8.06 | ||
PJ | 0.0068 | 0.0066 | 1.69 | 3.15 | 8.85 | 8.72 | 9.20 | 9.95 | 8.72 | ||
PV | 0.0066 | 0.0064 | 0.0034 | 3.01 | 8.62 | 8.53 | 8.98 | 9.74 | 8.48 | ||
PN | 0.0061 | 0.0059 | 0.0063 | 0.0060 | 8.46 | 8.26 | 8.82 | 9.58 | 8.38 | ||
AU | 0.0168 | 0.0166 | 0.0177 | 0.0172 | 0.0169 | 3.20 | 8.33 | 9.13 | 8.11 | ||
AE | 0.0166 | 0.0163 | 0.0174 | 0.0171 | 0.0165 | 0.0064 | 8.30 | 9.09 | 7.96 | ||
ESen | 0.0174 | 0.0171 | 0.0184 | 0.0180 | 0.0176 | 0.0167 | 0.0166 | 2.98 | 4.10 | ||
ES | 0.0187 | 0.0186 | 0.0199 | 0.0195 | 0.0192 | 0.0183 | 0.0182 | 0.0060 | 4.85 | ||
DM | 0.0165 | 0.0161 | 0.0174 | 0.0170 | 0.0168 | 0.0162 | 0.0159 | 0.0082 | 0.0097 |
aAverage Ks values between common cp protein coding genes of each species calculated using KaKs calculator program. bDivergence time was estimated by Ks/2λ, where λ = 1.0 × 10−9. PG to DM indicate abbreviated species name (Table 1).