Skip to main content
. Author manuscript; available in PMC: 2018 May 3.
Published in final edited form as: Neuron. 2017 May 3;94(3):611–625.e4. doi: 10.1016/j.neuron.2017.04.011
Assay Name Gene name Forward Primer Probe Reverse Primer
Actin Actin Beta AGGTCTTTACGGATGTCAACG ATTCCATACCCAAGAAGGAAGGCTGG ATTGGCAACGAGCGGTT
Syt1 Synaptotagmin 1 ATCATACACAGCCATCACCAG AGGTGCCATACTCGGAATTAGGTGG ACCCTCAATCCAGTCTTCAATG
Sst Somatostatin GGCATCATTCTCTGTCTGGTT AGTTCCTGTTTCCCGGTGGCA AGACTCCGTCAGTTTCTGC
Gad2 Glutamate decarboxylase 2 GCCTTGTCTCCTGTGTCATAG TGCATCAGTCCCTCCTCTCTAACCA CCTTGCAGTGTTCAGCTCT
Pv Parvalbumin CTTAGCTTTCAGCCACCAGAG ATCTTGCCGTCCCCATCCTTGTC CTGCTAAAGAAACAAAGACGCT
Syt2 Synaptotagmin 2 Mm.PT.51.12344265
NRXN1-all Neurexin 1 ACTACATCAGTAACTCAGCACAG CTTCTCCTTGACCACAGCCCCAT ACAAGTGTCCGTTTCAAATCTTG
NRXN1alpha Neurexin 1 alpha TCCTCTTAGACATGGGATCAGG CAACGGGATGGACGGTCAGGTA GTGTAGGGAGTGCGTAGTG
NRXN2alpha Neurexin 2 alpha GTCAGCAACAACTTCATGGG CTTCATCTTCGGGTCCCCTTCCT AGCCACATCCTCACAACG
NRXN3alpha Neurexin 3 alpha GGGAGAACCTGCGAAAGAG CTGCCGTCATAGCTCAGGATAGATGC ATGAAGCGGAAGGACACATC
CL1/Lphn1 Latrophilin 1 GACTGATGCTCTGACTCATGT TGGGCACACGAAGATGTAAGGGAC CTGGAACCTACAAATACCTGGA
CL2/Lphn2 Latrophilin 2 CTCGTGGTGGATATTGTGGTT TGACCCTGCCCAAGTGCCTAC TTACGGTATTCCCTGGAGTTTG
LRRTM2 Leucine-rich repeat transmembrane protein 2 GGCCACTTGAAATGTAAGCC TGCAGCCTCCAATGTGCTCAGAA CACTGCGTTGAGTCTGACAA
LRRTM3 Leucine-rich repeat transmembrane protein 3 CATATGCCAGAAAGGTTGACAC AGGCTCCAGGGAATGTGAGATACCT GAGATGCTGCTGAACGGAA
LRRTM4 Leucine-rich repeat transmembrane protein 4 GAAATAGCACCAGAAACACACTC ACGGAAACCCATCCTTTGTCATCCA GACCAAATAAGAAGAAAGCTGAGAG
NL1 Neuroligin 1 GGTTGGGTTTGGTATGGATGA TGAGGAACTGGTTGATTTGGGTCACC GATGTTGAGTGCAGTAGTAATGAC
NL1-ssA Neuroligin1 splice site A out CCAACTGAAGATGATATTCGGG GGGGTCCCAAACCAGTGATGGTGT CCAAGACACTCCCATCATACAG
Neuroligin 2 Neuroligin 2 CCGTGTAGAAACAGCATGACC TCAATCCGCCAGACACAGATATCCG TGCCTGTACCTCAACCTCTA
Neuroligin3 Neuroligin 3 CACTGTCTCGGATGTCTTCA CCTGTTTCTTAGCGCCGGATCCAT CCTCTATCTGAATGTGTATGTGC
Slitrk2 SLIT and NTRK-like protein 2 TCTTTAAGCACCTTCGATGTCA CCGTCTTCTCCTGATGTGTTTGCCT GCTAAACTACTGGTGGACTGAA
Slitrk3 SLIT and NTRK-like protein 3 GGCTTCATCATTCCTGGTTGA TGGAGCGAACCTCGGAGATCCT GACAGAATGACGGATACAATGC
Slitrk4 SLIT and NTRK-like protein 4 GTCACTGCCGACGAAGAG TCCAGAGATAAAGCTGCTCAAAGACCG CAGATCAAGTAGAGAGCATCGC
Slitrk5 SLIT and NTRK-like protein 5 GGTCCTGTTCCAAAGTTACTGG ACGTGCATTTTACCTCTGTTCCCATCT TGGGTCGGAGAAAGTTGC