Appendix 2—table 2.
Summary of the assigned intermolecular-NOE between the ISS-N1-u25g RNA and the UP1-R140A protein variant. These NOEs were observed in the 2D 13C F2-filtered (1H,1H)-NOESY or the 3D 13C F1-edited, F3-filtered [1H; 13C; 1H] NOESY-HSQC or in both spectra. The intensity of the reported intermolecular-NOE peaks are classified regarding their signal/noise ratio as follows: - weak: 7 ≤ S/N <12 - middle: 12 ≤ S/N <25 - strong: 25 ≤ S/N <45 - very strong: 45 ≤ S/N.
Nucleotide | Atom | Protein residue and atom | Intensity of inter-NOE |
---|---|---|---|
CYT11 | H1´ | F108QE F108HZ F148QD |
weak weak middle |
H5 | E176HB2 E176HB3 E176QG R178QD |
middle middle strong middle |
|
ADE12 | H1´ | F108QE M137QE F148QD F148QE F148HZ F150QD F150QE A180QB L181QD1 L181QD2 K183QB K183QG K183QE |
weak middle middle middle middle middle middle middle weak weak weak weak middle |
H2 | R178QD A180QB L181QD1 L181QD2 |
strong strong strong very strong |
|
H8 | F108QE E176HB2 E176HB3 E176QG R178QD A180QB L181QD1 L181QD2 |
weak middle middle strong strong strong middle very strong |
|
GUA13 | H1´ | M137QE F148QE F150QE |
very strong weak weak |
H8 | K106QE M137HG2 M137QE F148QE F150QE K183QE |
weak middle strong weak weak middle |
|
ADE22 | H1´ | F17QE G19HA3 F57HB2 F57HB3 F57QD |
very strong weak weak weak strong |
H8 | F17QE | weak | |
ADE23 | H1´ | F17QE F17HZ M46QE F57HZ F59QE F59HZ |
middle middle middle middle middle middle |
H2 | F17HZ M46QE F59HB2 F59HB3 F59QD F59QE A89HA A89QB V90HB |
strong middle middle middle strong strong middle very strong middle |
|
H8 | F17QD F17QE |
middle middle |
|
GUA24 | H1´ | M46QE F59QE |
very strong weak |
H2´ | M46QE F59QE F59HZ |
very strong middle middle |
|
H3´ | M46QE F57HZ F59QD F59HZ |
very strong middle middle middle |
|
H4´ | V44QG1 M46QE |
middle very strong |
|
H8 | M46QE F57QE F59QD F59QE F59HZ |
very strong middle middle middle middle |
|
GUA25 | H1´ | V44HB V44QG1 V44QG2 M46QE F59QD F59HZ |
middle very strong very strong very strong weak middle |
H8 | M46QE | very strong |