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. 2017 Jul 10;16:48. doi: 10.1186/s12941-017-0223-z

Table 1.

Primer and probe sequences for the in-house RT-PCR assay

Gene Primer pairs Product size, bp Probe
bla KPC for-GCGATACCACGTTCCGTCTG
rev-CGGTCGTGTTTCCCTTTAGC
183 6FAM-AGCGGCAGCAGTTTGTTGATTG–BBQ
bla NDM for-TTTGGCGATCTGGTTTTCCG
rev-ATCAAACCGTTGGAAGCGAC
101 LC610-AGACATTCGGTGCGAGCTGGC–BBQ
bla OXA-23-like for-CGCGACGTATCGGTCTTGAT
rev-CGCGACGTATCGGTCTTGAT
162 HEX-ACGTATTGGTTTCGGTAATGCTGA–BBQ
bla OXA-48-like for-GGCACGTATGAGCAAGATGC
rev-GTTTGACAATACGCTGGCTGC
182 a
bla VIM for-CCGAGTGGTGAGTATCCGAC
rev-GAATGCGTGGGAATCTCGTTC
337 Cy5-CGCTGTATCAATCAAAAGCAACTCATCA–BBQ

aThe melting-curve analysis for the OXA gene variants was performed with the OXA-48 primer. For the multiplex RT-PCR analysis a Light Mix Modular from TIB MOLBIOL Syntheselabor GmbH Berlin was used for OXA-48