Table 2. Top 10 CNV regions that contain protein-coding genes in Teladorsagia circumcincta RS3 strain showing the highest level of copy number increase relative to the Sinbred strain.
| CNV region | Log2 ratio (RS3/Sinbred) |
Overlapping gene | |
|---|---|---|---|
| Cont17796:492–5412 |
8.8 |
TELCIR_20472 | Conserved domain protein |
| TELCIR_20473 | Hypothetical protein | ||
| Cont4607:20664–27060 | 7.2 | TELCIR_13581 | Conserved domain protein |
| Cont13316:492–8364 | 6.1 | TELCIR_19247 | ABC transporter (Tci-pgp-9) |
| Cont196631:492–2460 | 6.0 | TELCIR_23120 | Hypothetical protein |
| Cont15521:492–3936 | 4.8 | TELCIR_19884 | ABC transporter (Tci-pgp-9) |
| Cont5:324720–326196 | 4.4 | TELCIR_00177 | Conserved hypothetical protein |
| Cont204265:492–1968 | 3.3 | TELCIR_23838 | Conserved hypothetical protein |
| Cont4815:28044–30504 |
3.3 |
TELCIR_13812 | Hypothetical protein |
| TELCIR_13813 | ABC transporter (Tci-pgp-9) | ||
| Cont1731:492–7872 |
2.9 |
TELCIR_08884 | Hypothetical protein |
| TELCIR_08885 | ABC transporter (Tci-pgp-9) | ||
| Cont1090:71832–80196 | 2.9 | TELCIR_07060 | Hypothetical protein |