Table 6. NGS statistics from 28 input libraries.
Parameter | Mean | Median | CV* | Minimum | Maximum | |
---|---|---|---|---|---|---|
Mapping Rate | 99.04% | 99.40% | 0.90% | 96.44% | 99.71% | |
On-Target Rate | 99.83% | 99.85% | 0.07% | 99.58% | 99.90% | |
Coverage Uniformity | 98.51% | 98.66% | 0.71% | 96.97% | 99.25% | |
Base coverage | Mean | 6445 | 6489 | 4582 | 7435 | |
Median | 4287 | 4272 | 3176 | 5578 | ||
Maximum | 26164 | 25752 | 16439 | 37138 | ||
Minimum | 831 | 838 | 463 | 1037 | ||
Percent of bases with coverage depth greater than Nx relative to mean base coverage | 0.1x | 100.00% | 100.00% | 0.00% | 100.00% | 100.00% |
0.15x | 99.89% | 100.00% | 0.34% | 98.90% | 100.00% | |
0.20x | 99.49% | 100.00% | 0.69% | 97.60% | 100.00% | |
0.30x | 92.04% | 92.50% | 2.05% | 87.60% | 95.00% | |
0.40x | 74.82% | 74.90% | 3.30% | 69.30% | 79.40% | |
0.50x | 62.44% | 62.70% | 3.81% | 56.50% | 66.30% | |
0.75x | 47.86% | 48.25% | 4.30% | 44.00% | 50.90% | |
1.0x | 38.03% | 38.45% | 4.71% | 33.00% | 40.00% |
Individual library statistics are shown in S6 Table.
*Coefficient of variance