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. 2017 Jun 15;28(1):1335165. doi: 10.1080/16512235.2017.1335165

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© 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 6. — Trajectories for individual sifakas during infection and recovery relative to measures of gut microbial (a) alpha and (b) beta diversity. (a) Shannon index (solid lines) incorporates species richness and evenness, whereas phylogenetic diversity (dashed lines) quantifies taxonomic relatedness across communities. Vertical lines mark the onset of antimicrobial (orange) and antibiotic (red) treatments. (b) Principal coordinates analysis plots of UniFrac distance, weighted by relative abundance.