Table 2.
Detailed information of differentially expressed lncRNAs and predicted target mRNAs in Palythoa caribaeorum.
| lncRNA ID | Target mRNAs number | Target mRNAs annotation information |
|---|---|---|
| Unigene72046↑ | 24 | Aminotransferase; uncharacterized protein; trypsin-3-like; retinoic acid receptor; islet cell autoantigen; carbonic anhydrase; histone acetyltransferase; ranBP-type and C3HC4-type zinc finger-containing protein; epidermal growth factor receptor substrate; putative acyl-coenzyme A oxidase; ras-related protein Rab-24; probable UDP-sugar transporter protein; ubiquitin-like protein fubi and ribosomal protein; hypothetical protein; hypothetical protein*; NEDD8-conjugating enzyme; protease regulatory subunit; transmembrane protease; |
| Unigene69139↑ | 11 | uncharacterized protein;stimulator of interferon genes protein; THO complex 1; complement factor B; transmembrane protein 181; charged multivesicular body protein; hypothetical protein; UDP-glucuronosyltransferase; elongator complex protein; histamine N-methyltransferase; integrator complex subunit; |
| Unigene57713↓ | 10 | agglutinin biogenesis protein MshQ; hypothetical protein; predicted protein*; glutamate 5-kinase; methionine synthase; membrane protein metalloendopeptidase; unknown protein; MSHA biogenesis protein; GTP-binding protein; |
| Unigene7497↓ | 9 | glycerol-3-phosphate acyltransferase; hypothetical protein; uncharacterized protein; N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; ubiquitin-conjugating enzyme; thiosulfate sulfurtransferase/rhodanese-like domain-containing protein; ubiquitin carboxyl-terminal hydrolase; RNA-directed DNA polymerase; |
| Unigene1657↓ | 6 | enolase-like protein;predicted protein*; poly [ADP-ribose] polymerase isoform X2; poly(A) polymerase central domain protein; hypothetical protein; motile sperm domain-containing protein; |
| Unigene62981↓ | 6 | cGMP-dependent 3′,5′-cyclic phosphodiesterase;chitinase 3-like; fibropellin-1-like; probable serine-O-acetyltransferase; phosphatidate cytidylyltransferase; uncharacterized protein; |
| Unigene83429↓ | 5 | arginine/serine-rich protein PNISR isoform;protein kinase; splicing factor, arginine/serine-rich 18-like; |
| Unigene16589↓ | 4 | uncharacterized protein; hypothetical protein; mannose-binding lectin associated serine protease; phytanoyl-CoA dioxygenase; |
| CL1738.Contig1↑ | 3 | DNA-directed RNA polymerase III; uncharacterized protein*; predicted protein*; |
| CL7909.Contig1↑ | 3 | predicted protein*; steroid 17-alpha-hydroxylase; |
| CL1253.Contig5↑ | 2 | transcription factor MYTF; mitochondrial inner membrane protease subunit; |
| CL1417.Contig2↑ | 1 | hypothetical protein; |
| CL4186.Contig1↑ | 1 | uncharacterized protein; |
| Unigene55440↓ | 1 | rab3 GTPase-activating protein catalytic subunit; |
| Unigene69919↑ | 1 | glucose transporter; |
| Unigene70419↑ | 1 | predicted protein*; |
| Unigene81587↓ | 1 | predicted protein*; |
*Represents protein uniquely annotated in cnidarian, i.e., Nematostella vectensis, Hydra vulgaris.
↑Represents up-regulated in Bleaching P. caribaeorum versus Healthy P. caribaeorum.
↓Represents down-regulated in Bleaching P. caribaeorum versus Healthy P. caribaeorum.