Table. BLAST analysis of the 12 putative mature proteins and the polyprotein of novel pestivirus Linda virus from pigs with congenital tremor, Austria, 2015*.
| Putative mature protein | Amino acid region | Best BLAST hit (GenBank accession no.) | Alignment coverage, % | E-value | Identity, % |
|---|---|---|---|---|---|
| Npro | 1–182 | BV (YP_008992092.1) | 96 | 4 × 10–64 | 60 |
| Core | 183–283 | BV (YP_008992092.1) | 95 | 3 × 10–43 | 83 |
| Erns | 284–504 | BV (YP_008992092.1) | 100 | 5 × 10–117 | 74 |
| E1 | 505–702 | BV (YP_008992092.1) | 100 | 3 × 10–82 | 67 |
| E2 | 703–1077 | BV (YP_008992092.1) | 98 | 4 × 10–140 | 53 |
| P7 | 1078–1152 | BV (YP_008992092.1) | 100 | 1 × 10–25 | 60 |
| NS2 | 1153–1608 | BV (YP_008992092.1) | 99 | 0.0 | 63 |
| NS3 | 1609–2291 | BV (YP_008992092.1) | 100 | 0.0 | 85 |
| NS4A | 2292–2354 | BV (YP_008992092.1) | 100 | 2 × 10–28 | 81 |
| NS4B | 2355–2701 | BV (YP_008992092.1) | 100 | 0.0 | 78 |
| NS5A | 2702–3205 | BV (YP_008992092.1) | 100 | 0.0 | 53 |
| NS5B | 3206–3923 | BV (YP_008992092.1) | 99 | 0.0 | 73 |
*BV, Bungowannah virus; E, envelope; NS, nonstructural.