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. Author manuscript; available in PMC: 2017 Jul 17.
Published in final edited form as: Methods Mol Biol. 2015;1316:1–11. doi: 10.1007/978-1-4939-2730-2_1

Fig. 3.

Fig. 3

Left: Partial list for the predicted base pairing probabilities for the glycine riboswitch. The first two columns are the position and the nucleotide type of residue i; the fourth and fifth columns are the nucleotide type and position for residue j; the last column is the probability of forming the i, j base pair. Right: predicted most probable 2D structure derived from the base pairs with probability pij around 0.90 (e.g., 0.89, 0.95)