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. 2017 Jan 10;8:13954. doi: 10.1038/ncomms13954

Table 2. Evolutionary timescales of FVs and FLERVs.

Node* Total per-lineage substitution (substitutions per site)
Evolutionary timescale (million years)
Ref
  Median 95% HPD Median 95% HPD  
I 0.031 0.017–0.048 0.96 0.69–1.21 (ref. 39)
II 0.080 0.057–0.107 8.29 6.52–10.05 (ref. 40)
III 0.126 0.097–0.163 16.52 13.33–19.61  
IV 0.160 0.123–0.199 31.60 25.36–37.85  
V 0.292 0.238–0.349 43.43 38.39–48.08  
VI 0.348 0.288–0.413 86.92 76.34–97.22  
VII 0.381 0.315–0.454 98.59 95.94–100.78 (ref. 35)
VIII 0.436 0.357–0.523 100.95 98.40–103.83  
IX 0.559 0.464–0.660 103.92 99.73–109.09  
X 0.764 0.641–0.889 262.76 195.00–342.08 NA
XI 0.908 0.771–1.056 347.89 250.62–479.97  
XII 1.071 0.869–1.274 454.65 303.69–683.66  

*Referring to the node numbers in the viral tree in Fig. 3 (left). Total per-lineage substitution and evolutionary timescale estimates of nodes I–IX were used to estimate the power-law time-dependent rate phenomenon model (Fig. 4). The model was then extrapolated to infer the timescale of nodes X–XII from their total per-lineage substitution estimates.

Evolutionary timescale of nodes I–IX were directly inferred from those of their hosts. The references refer to the host date references.

‘95% HPD’=95% highest probability density interval.