Table 3.
Mean number of clades with a given support, posterior probability (PP) or bootstrap percentage (BP) obtained by different methods for particular markers
| Marker | 7 taxa | 11 taxa | ||||
|---|---|---|---|---|---|---|
| PP > 0.70 or BP > 50 | PP > 0.95 or BP > 70 | PP > 0.99 or BP > 90 | PP > 0.70 or BP > 50 | PP > 0.95 or BP > 70 | PP > 0.99 or BP > 90 | |
| 12 s rRNA | 1.88 | 0.00 | 0.00 | 3.38 | 1.38 | 1.00 |
| 16 s rRNA | 0.88 | 0.38 | 0.00 | 4.25 | 1.25 | 1.00 |
| atp6 | 0.63 | 0.00 | 0.00 | 2.50 | 1.25 | 0.38 |
| atp8 | 1.13 | 0.00 | 0.00 | 2.88 | 1.13 | 0.13 |
| cox1 | 1.25 | 0.34 | 0.00 | 2.50 | 1.13 | 1.00 |
| cox2 | 1.25 | 0.00 | 0.00 | 1.75 | 0.75 | 0.38 |
| cox3 | 1.25 | 0.00 | 0.00 | 2.13 | 1.13 | 0.63 |
| CR | 3.38 | 2.88 | 1.38 | 7.25 | 4.88 | 3.63 |
| cytb | 1.13 | 0.00 | 0.00 | 3.00 | 1.38 | 1.00 |
| nd1 | 1.88 | 1.00 | 0.00 | 3.00 | 2.75 | 1.13 |
| nd2 | 0.13 | 0.00 | 0.00 | 2.88 | 2.50 | 1.25 |
| nd3 | 0.63 | 0.00 | 0.00 | 1.50 | 0.00 | 0.00 |
| nd4 | 2.25 | 0.50 | 0.00 | 3.38 | 1.13 | 0.50 |
| nd4L | 1.13 | 0.50 | 0.00 | 1.00 | 0.00 | 0.00 |
| nd5 | 0.25 | 0.00 | 0.00 | 4.25 | 2.38 | 1.25 |
| nd6 | 0.63 | 0.00 | 0.00 | 1.63 | 1.00 | 0.88 |
| tRNA1 | 2.63 | 1.13 | 0.00 | 2.75 | 0.00 | 0.00 |
| tRNA2 | 2.00 | 0.63 | 0.13 | 3.63 | 1.38 | 0.38 |
The maximum number of possible clades that can receive any support is 4 for 7-taxa set and 8 for 11-taxa set