Table 2.
Summary statistics for all populations calculated for dataset 1
| Regional population | Locality | Pre‐ or post‐epizootic | Mean N per locus | Private alleles | Total sites across dataset | Polymorphic sites | % Polymorphic loci | Mean freq. of major allele (P) | Observed heterozygosity | Nucleotide diversity (π) | Haplotypediversity (h) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Western | Regional | Pre | 34.42 | 3,354 | 309,312 | 11,585 | 3.75 | .9965 | 0.0046 | 0.0054 | 0.78 |
| Arizona (AZ) | Pre | 5.83 | 551 | 300,467 | 5,401 | 1.80 | .9967 | 0.0047 | 0.0054 | 0.77 | |
| California (CA) | Pre | 5.60 | 286 | 242,436 | 4,024 | 1.66 | .9969 | 0.0044 | 0.0050 | 0.71 | |
| Post | 5.68 | 354 | 242,420 | 4,094 | 1.69 | .9968 | 0.0045 | 0.0051 | 0.72 | ||
| Colorado (CO) | Pre | 5.61 | 351 | 236,289 | 4,063 | 1.72 | .9968 | 0.0046 | 0.0052 | 0.74 | |
| New Mexico (NM) | Pre | 5.67 | 251 | 157,265 | 2,728 | 1.73 | .9967 | 0.0047 | 0.0053 | 0.76 | |
| Nevada (NV) | Pre | 5.66 | 289 | 196,967 | 3,520 | 1.79 | .9966 | 0.0048 | 0.0055 | 0.80 | |
| Texas (TX) | Pre | 5.35 | 260 | 179,373 | 2,972 | 1.66 | .9968 | 0.0046 | 0.0052 | 0.73 | |
| Washington (WA) | Pre | 4.70 | 340 | 294,586 | 4,465 | 1.52 | .9969 | 0.0044 | 0.0050 | 0.73 | |
| Eastern | Regional | Pre | 26.11 | 384 | 309,404 | 7,591 | 2.45 | .9967 | 0.0045 | 0.0051 | 0.72 |
| Alabama (AL) | Pre | 5.80 | 79 | 299,625 | 4,636 | 1.55 | .9969 | 0.0044 | 0.0049 | 0.68 | |
| Post | 5.75 | 90 | 312,905 | 4,781 | 1.53 | .9969 | 0.0043 | 0.0049 | 0.68 | ||
| Maine (ME) | Pre | 5.58 | 59 | 267,323 | 3,995 | 1.49 | .9969 | 0.0043 | 0.0048 | 0.70 | |
| New York (NY) | Pre | 5.48 | 44 | 239,907 | 3,614 | 1.51 | .9969 | 0.0046 | 0.0049 | 0.70 | |
| Post | 3.52 | 47 | 254,607 | 3,046 | 1.20 | .9971 | 0.0042 | 0.0047 | 0.68 | ||
| Ohio (OH) | Pre | 5.67 | 35 | 190,969 | 2,955 | 1.55 | .9968 | 0.0046 | 0.0050 | 0.71 | |
| Ontario (ON) | Pre | 5.52 | 70 | 287,609 | 4,202 | 1.46 | .9970 | 0.0042 | 0.0047 | 0.67 | |
| Post | 4.80 | 61 | 284,382 | 3,959 | 1.39 | .9970 | 0.0043 | 0.0048 | 0.68 | ||
| Hawaiian | Regional | NA | 10.45 | 393 | 309,429 | 5,373 | 1.74 | .9969 | 0.0041 | 0.0047 | 0.67 |
| Kauai (HK) | NA | 3.00 | 103 | 287,622 | 2,654 | 0.92 | .9974 | 0.0039 | 0.0041 | 0.57 | |
| Maui (HM) | NA | 3.00 | 35 | 114,494 | 1,191 | 1.04 | .9971 | 0.0044 | 0.0047 | 0.70 | |
| Oahu (HO) | NA | 5.69 | 208 | 293,342 | 3,826 | 1.30 | .9972 | 0.0039 | 0.0044 | 0.62 | |
| Outgroup | Guerrero, Mexico (griscomi) (GU) | NA | 4.48 | 959 | 272,498 | 2,815 | 1.03 | .9975 | 0.0035 | 0.0038 | 0.56 |
| Haemorhous cassinii (CC) | NA | 2.00 | 1,417 | 129,397 | 1,172 | 0.91 | .9971 | 0.0044 | 0.0049 | 0.71 | |
| Haemorhous purpeurus (CP) | NA | 2.00 | 1,588 | 143,094 | 1,153 | 0.81 | .9973 | 0.0029 | 0.0045 | 0.65 |