Table 2.
Oligonucleotides and plasmids used in this work.
| Name | Sequence | Reference |
|---|---|---|
| Transposon generation | ||
| pMOD2 | Source of Tn5 terminal ends, AmpR | Epicentre Biotechnology |
| pMOD2-tetT7 | tetR pMOD2 derivative, containing outwards facing T7 promoters at both transposon ends | This work |
| Fw-Tet-pMOD2T7 | CGCTAGTCTAGACCCTATAGTGAGTCGTATTAGCTCATGTACGGTAAGGAG | This work |
| Rev-Tet-pMOD2T7 | CGCTAGGCATGCCCCTATAGTGAGTCGTATTAGCAAAACCCTCGGTCGGTCTGACCGGGGGTTTTGATTACATTACCTTCTGAAACATATGGC | This work |
| pMOD < MCS > Fw | ATTCAGGCTGCGCAACTGT | Epicentre Biotechnology |
| pMOD < MCS > Rev | GTCAGTGAGCGAGGAAGCGGAAG | Epicentre Biotechnology |
| TraDIS sequencing approach | ||
| 5′ PCR enrichment primer sequence | AATGATACGGCGACCACCGAGATCTACACAATTCGAGCCAATATGCGAGAACACCCG | This work |
| 3′ PCR enrichment primer sequence | AATGATACGGCGACCACCGAGATCTACACATGCAAGCTTGCCAACGACTACGCACTAGC | This work |
| 5′ Sequencing primer sequence | ACCCGAGAAAATTCATCGATGATGGTTGAGATGTGTA | This work |
| 3′ Sequencing primer sequence | ACCCGAGAAAATTCATCGATGATGGTTGAGATGTGTA | This work |
aRestriction sites are underlined.