Skip to main content
. 2015 Jun 17;1:15007. doi: 10.1038/npjbiofilms.2015.7

Figure 5.

Figure 5

Linking key functionalities to important community members. (a) Phylogenetic tree based on the AmoA amino acid sequence derived from a contig extended using combined metagenomic and metatranscriptomic data (K10944_ctg_3). (b) Circos plot of the genome of Isolate LCSB065, highlighting amino acid similarity of encoded proteins to the Rhodococcus erythropolis PR4 genome and genes involved in poly-hydroxybutyrate (PHB) and TAG accumulation as well as encoded extracellular lipases. From the outside to the inside track: contigs (green) arranged by size; A: open reading frames in forward direction; B: open reading frames in reverse direction; colours in tracks A and B indicate %-similarity to the Rhodococcus erythropolis PR4 genome; C: %G+C in 1,000 bp sliding windows. Highlighted rays indicate the location of genes involved in PHB metabolism (violet), genes involved in TAG metabolism (blue) and extracellular lipase genes (green). TAG, triacylglycerol.