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. 2005 Jan 31;6(2):R11. doi: 10.1186/gb-2005-6-2-r11

Table 1.

Number of exons and chromosomal localization of the 78 orthologous D. melanogaster, D pseudoobscura and A. gambiae OXPHOS genes

Cluster ID* Protein name D. melanogaster gene name Number of exons Map position FlyBase ID D. pseudoobscura gene name Number of exons Map position A. gambiae gene name Number of exons Map position
Complex I: NADH:ubiquinone oxidoreductase
NUMM 13 kDa A subunit CG8680 3 2L;25C6 FBgn0031684 Dpse\CG8680 3 4 agEG14117 3 3R;33B
NUFM 13 kDa B subunit CG6463 3 3L;67E7 FBgn0036100 Dpse\CG6463 3 XR agEG15380 3 2L22E
NIPM 15 kDa subunit CG11455 2 2L;21B1-2 FBgn0031228 Dpse\CG11455 2 4 agEG13302 2 3R;35C-D
NUYM 18 kDa subunit CG12203 3 X;18C7 FBgn0031021 Dpse\CG12203 3 XL agEG18985 4 2L;27A
NUPM 19 kDa subunit CG3683 4 2R;60D13 FBgn0035046 Dpse\CG3683 4 3 agEG19249 3 2L;26B
NUKM 20 kDa subunit CG9172 1 X; 14A5 FBgn0030718 Dpse\CG9172 1 ND agEG16939 1 X;4A
NUIM 23 kDa subunit ND23 3 3R;89A5 FBgn0017567 Dpse\CG3944 3 2 agEG9698 2 2R;9A
NUHM 24 kDa subunit CG5703 3 X; 16B10 FBgn0030853 Dpse\CG5703 3 XL agEG16953 5 2R;11A
NUGM 30 kDa subunit CG12079 3 3L;63B7 FBgn0035404 Dpse\CG12079 3 XR agEG11610 3 2L;24D
NUEM 39 kDa subunit CG6020 4 3L;77C6 FBgn0037001 Dpse\CG6020 4 XR agEG18760 3 3L;40A
NUDM 42 kDa subunit ND42 2 3R;94A1 FBgn0019957 Dpse\CG6343 2 2 agEG10090 2 3L;41C
NUCM 49 kDa subunit CG1970 6 4;102C2 FBgn0039909 Dpse\CG1970 6 ND agEG18856 1 X;1B
NUBM 51 kDa subunit CG9140 4 2L;26B6-7 FBgn0031771 Dpse\CG9140 4 4 agEG9927 4 3R;36D
NUAM 75 kDa subunit ND75 5 X;7E1 FBgn0017566 Dpse\CG2286 5 XL agEG19681 4 2R;8D
NI8M B8 subunit CG15434 3 2L;24F3 FBgn0040705 Dpse\CG15434 3 4 agEG16251 3 2R;15B
NB2M B12 subunit CG10320 2 2R;57F6 FBgn0034645 Dpse\CG10320 2 3 agEG9277 1 3L;46D
NB4M B14 subunit CG7712 3 2R;47C6 FBgn0033570 Dpse\CG7712 3 3 agEG12033 2 2R;15A
N4AM B14.5A subunit CG3621 2 X; 2D6-E1 FBgn0025839 Dpse\CG3621 2 XL agEG14707 4 2R;17A
N4BM B14.5B subunit CG12400 3 2L:23D3 FBgn0031505 Dpse\CG12400 3 4 agEG16232 3 2R;13C
NB5M B15 subunit CG12859 2 2R;51C2 FBgn0033961 Dpse\CG12859 2 3 agEG17759 2 3L;44C
NB6M B16.6 subunit CG3446 2 X;5F2 FBgn0029868 Dpse\CG3446 2 XL agEG7829 3 3R;35A
NB7M B17 subunit l(2)35Di 3 2L;35D FBgn0001989 Dpse\CG13240 3 4 agEG18567 3 3R;34D
N7BM B17.2 subunit CG3214 4 2L;23A1 FBgn0031436 Dpse\CG3214 4 4 agEG10758 4 3R;31A
NB8M B18 subunit CG5548 1 X;13A8 FBgn0030605 Dpse\CG5548 1 XL agEG8436 3 2L;28C
NI2M B22 subunit CG9306 3 2L;34B8 FBgn0032511 Dpse\CG9306 3 4 agEG12344 3 3R;35C-D
ACPM Acyl carrier mtacp1 4 3L;61F6 FBgn0011361 Dpse\CG9190 4 XR agEG11237 5 3L;38B
NIAM ASHI subunit CG3192 3 X;6C5 FBgn0029888 Dpse\CG3192 3 XL agEG8821 3 2R;10A
NUML MLRQ subunit CG32230 3 3L;80E2 FBgn0052230 Dpse\CG32230 3 XR agEG12063 3 2R;15A
NINM MNLL subunit CG18624 1 X;7C FBgn0029971 Dpse\CG18624 1 XL agEG22692 1 X;5A
NIDM PDSW subunit Pdsw 3 2L;23F3 FBgn0021967 Dpse\CG8844 3 4 agEG7887 4 3R;29A
NISM SGDH subunit l(3)neo18 4 3L;68F5 FBgn0011455 Dpse\CG9762 4 XR agEG13573 2 2L;27D
NIGM AGGG subunit CG40002 3 ND FBgn0058002 Dpse\CG40002 3 XR agEG18653 2R;12D
Complex II: Succinate dehydrogenase
DHSA Flavoprotein subunit Scs-fp 4 2R;56D3 FBgn0017539 Dpse\CG17246 4 3 agEG7754 3 3L;38B
DHSB Iron-sulfur protein SdhB 3 2R;42D3-4 FBgn0014028 Dpse\CG3283 3 3 agEG13539 4 2L;27D
C560 Cytochrome B560 subunit CG6666 2 3R;86D7-8 FBgn0037873 Dpse\CG6666 2 2 agEG14929 2 3L;39B
DHSD Cytochrome b small subunit CG10219 4 3R;95B1 Fbgn0039112 Dpse\CG10219 4 XR agEG16772 3 X;1C
Complex III: Ubiquinol-cytochrome c reductase
UCRY 6.4 kDa protein CG14482 2 2R;54C9 FBgn0034245 Dpse\CG14482 2 3 agEG12505 2 3L;43B
UCRX 7.2 kDa protein ox 2 2R;49C2 FBgn0011227 Dpse\CG8764 2 3 agEG15210 2 2L;20C
UCRH 11 kDa protein Ucrh 2 3R FBgn0066066 Dpse\Ucrh 2 2 agEG19398 2 2R;11B
UCR6 14 kDa protein CG3560 3 X;14B10 FBgn0030733 Dpse\CG3560 3 XL agEG11611 3 3L;46A
UCRI Iron-sulfur subunit RFeSP 3 2L;22A3 FBgn0021906 Dpse\CG7361 3 4 agEG16975 4 3R;32C
CY1 Cytochrome c1, heme protein CG4769 6 3L;64C13 FBgn0035600 Dpse\CG4769 6 XR agEG19223 4 2L;26C
UCR1 Core protein 1 CG3731 6 3R;88D6 FBgn0038271 Dpse\CG3731 6 2 agEG21302 3 X;5C
UCR2 Core protein 2 CG4169 4 3L;73A10 FBgn0036642 Dpse\CG4169_1 4 XR agEG17930 4 2L;24A
UCRQ Ubiquinone-binding protein QP- CG7580 2 3L;74C3 FBgn0036728 Dpse\CG7580 2 XR agEG20223 2 3L;38C
Complex IV: Cytochrome c oxidase
CX41 Polypeptide IV CG10664 2 2L;38A8 FBgn0032833 Dpse\CG10664 2 4 agEG13327 2 3R;31C
COXA Polypeptide Va CoVa 1 3R;86F9 FBgn0019624 Dpse\CG14724 1 2 agEG19581 1 3L;41D
COXB Polypeptide Vb CG11015 3 2L;26E3 FBgn0031830 Dpse\CG11015 3 4 agEG8633 4 3R;31C
COXD Polypeptide VIa CG17280 2 2R;59E3 FBgn0034877 Dpse\CG17280 2 3 agEG7821 2 X;5A
COXG Polypeptide VIb CG18809 1 X;18E5 FBgn0042132 Dpse\CG18809 1 XL agEG11043 1 2L;25A
COXH Polypeptide VIc cype 2 2L;25D6 FBgn0015031 Dpse\CG14028 2 4 EST357342 2 3R;29A
COXK Polypeptide VIIa CG9603 2 3R;84F13 FBgn0040529 Dpse\CG9603 2 XR agEG17423 3 X;4B
COXO Polypeptide VIIc CG2249 2 2R;46D8-9 FBgn0040773 Dpse\CG2249 2 3 agEG22887 2 2L;28C
Complex V: ATP synthase
ATPA Alpha chain blw 4 2R;59B1-2 FBgn0011211 Dpse\CG3612 4 3 agEG7500 4 2L;21E
ATPB Beta chain ATPsyn-beta 3 4;102D1 FBgn0010217 Dpse\CG11154 3 ND agEG14379 1 3L;45C
ATPG Gamma chain ATPsyn-gamma 1 3R;99B10 FBgn0020235 Dpse\CG7610 1 2 agEG7678 2 3R;29C
ATPD Delta chain CG2968 3 X;9B4 FBgn0030184 Dpse\CG2968 3 ND agEG16076 1 3R;29B
ATPE Epsilon chain sun 4 X;13F12 FBgn0014391 Dpse\CG9032 4 ND agEG10095 4 X;3D
ATPF B chain ATPsyn-b 3 3L;67C5 FBgn0019644 Dpse\CG8189 3 XR agEG9580 3 2R;7A
ATPQ D chain ATPsyn-d 1 3R;91F FBgn0016120 Dpse\CG6030 1 ND agEG10180 3 3L;41C
ATPJ E chain CG3321 1 3R;88B4 FBgn0038224 Dpse\CG3321 1 2 agEG10809 3 2L;26B
ATPK F chain CG4692 2 2R;60D8-9 FBgn0035032 Dpse\CG4692 2 3 agEG1544 1 ND
ATPN G chain l(2)06225 2 2L;32C1 FBgn0010612 Dpse\CG6105 2 ND agEG8590 2 3R;34B
ATPR Coupling factor 6 ATPsyn-Cf6 2 3R;94E13 FBgn0016119 Dpse\CG4412 2 2 agEG19097 2 2R;19D
AT91 Lipid-binding protein P1 CG1746 3 3R;100B7 FBgn0039830 Dpse\CG1746 3 2 agEG14837 3 X;2B
ATPO OSCP Oscp 3 3R;88E8-9 FBgn0016691 Dpse\CG4307 3 2 agEG9393 3 2R;15D
Others
ATPW ATP synthase coupling factor B CG10731 1 2R;52F FBgn0034081 Dpse\CG10731 1 3 agEG15185 1 2R;19B
CI30 Complex I intermediate- associate protein 30 CG7598 2 3R;99B9 FBgn0039689 Dpse\CG7598 2 2 agEG7818 2 X;5A
CYC Cytochrome C Cyt-c-p 1 2L;36A11 FBgn0000409 Dpse\CG17903 1 4 agEG17602 1 3R;34C
COXZ Complex IV assembly protein COX11 CG6922 1 2L;25E5 FBgn0031712 Dpse\CG6922 1 4 agEG19985 2 3L;38B
COXS Complex IV copper chaperone CG9065 2 X;13A9 FBgn0030610 Dpse\CG9065_1 2 XL agEG23169 1 3L;44C
OXA1 Biogenesis protein OXA1 CG6404 3 3L;67F1 FBgn0027615 Dpse\CG6404 3 XR agEG11581 3 2L;22C
ETFA Electron transfer flavoprotein alpha subunit wal 3 2R;48C1-2 FBgn0010516 Dpse\CG8996 3 3 agEG11798 2 2R;17B
ETFB Electron transfer flavoprotein beta subunit CG7834 2 3R;99C1 FBgn0039697 Dpse\CG7834 2 2 agEG13614 2 2R;19D
ETFD Electron transfer flavoprotein- ubiquinone oxidoreductase CG12140 5 2R;46C4 FBgn0033465 Dpse\CG12140 5 3 agEG10998 4 2L;23B
COXX Protoheme IX farnesyltransferase CG5037 4 2L;31D9 FBgn0032222 Dpse\CG5037 3 ND agEG11452 4 3R;32B
SCO1 Sco1 protein homolog CG8885 2 2L;25B5 FBgn0031656 Dpse\CG8885 2 4 agEG10475 1 3R;31C
SUR1 Surfeit locus protein 1 Surf1 4 3L65D4 FBgn0029117 Dpse\CG9943 4 XR agEG8998 4 2L;25C

*IDs in this column are taken from Swiss-Prot [20]. Only coding exons were considered. ND, map position not determined. D. melanogaster, D. pseudoobscura and A. gambiae sequences used to determine intron-exon gene structures are available as supplementary material at the MitoComp website [22]