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. 2017 Jul 19;12(7):e0180484. doi: 10.1371/journal.pone.0180484

Table 1. Assembly summary statistics and validation of Utricularia reniformis mtDNA master circle (MC) genome.

Number of mtDNA-related paired-end reads (2x300bp ~600bp) 1,787,363
Number of mtDNA-related mate-paired reads (2x100bp ~3kbp) 178,224
Total assembled size (excluding repeats > 500bp)(bp) 831,638bp
PE assembly statistics
    - Nodes 13
    - Edges 8
    - Dead ends 14 (53.85%)
    - Connected components 5
    - Contigs 7
    - Longest contig size 335,336bp
    - Shortest contig size 40,798bp
    - Average contig size 118,634bp
    - N50 230,405
    - L50 2
Master circle size (bp) 857,234
Master circle size GC% 43,98
  - Average coverage
    - Paired-end 956x (st.dev. 265)
    - Mate-pairs 40.98x (st.dev. 20.9)
    - Long Repeat (LR) coverage (25kb) 1,342 (st.dev. 200)
    - Small Repeat (SR) coverage (3.2kb) 1,201 (st. dev. 240)
  - Mapped reads in pairs
    -paired-end reads 1,762,585 (98.61%)
    -mate-paired reads 177,316 (99.49%)
  - uncalled MC bases (Ns) 9 (0.0010%)
RNAseq mapping
    - Total Number of Reads (single-end ~200bp) 1,213,898
    - Mitochondrial genome covered (bp) 672,561 (78.45%)
    - Average coverage 83.9x (st. dev. 566.4)