Table 4.
Bacterial strains used for the PCR studies.
| Strain | Isolation source | PCR slpH# | slpH group | ST | PCR Lgall# |
|---|---|---|---|---|---|
| Lactobacillus helveticus | |||||
| FAM 14501 | Unknown | + | 3 | 20 | − |
| FAM 14761 | Unknown | + | 2 | 11 | − |
| FAM 221551 | Natural whey culture | + | 2 | 11 | − |
| FAM 214931 | Mixed strain starter | + | 1 | 14 | − |
| FAM 220811 | Unknown | + | 3 | 20 | − |
| FAM 214561 | Mixed strain starter | + | 1 | 15 | − |
| FAM 81041 | Raw milk cheese | + | 1 | 13 | − |
| FAM 81051 | Raw milk cheese | + | 1 | 13 | − |
| FAM 130191 | Natural whey culture | + | 2 | 10 | − |
| FAM 86271 | Unknown | + | 2 | 1 | − |
| FAM 213391 | Mixed strain starter | + | 1 | 14 | − |
| FAM 220761 | Natural whey culture | + | 2 | 1 | − |
| FAM 232351 | Unknown | + | 3 | 23 | − |
| FAM 205751 | Natural whey culture | + | 2 | 8 | − |
| FAM 223301 | Mixed strain starter | + | 3 | 17 | − |
| FAM 12131 | Unknown | + | 3 | 22 | − |
| FAM 11721 | Unknown | + | 1 | 13 | − |
| FAM 220791 | Natural whey culture | + | 2 | 3 | − |
| Lactobacillus gallinarum | |||||
| DSM 10532T, 1 | Chicken crop | + | 3 | − | + |
| FAM 19411 | Chicken crop | + | 3 | − | + |
| LMG 147511 | Chicken feces | + | − | − | + |
| LMG 147541 | Chicken feces | + | − | − | + |
| LMG 147551 | Chicken feces | + | − | − | + |
| LMG 181811 | Chicken intestine | + | − | − | + |
| LMG 228701 | Laying hen vagina | + | − | − | + |
| Lactobacillus kefiranofaciens kefiranofaciens | |||||
| DSM 5016T, 1 | Kefir grains | − | − | − | − |
| Lactobacilus kefiranofaciens kefirgranum | |||||
| DSM 10550T, 1 | Kefir grains | − | − | − | − |
| Lactobacillus delbrueckii bulgaricus | |||||
| DSM 20081T, 1 | Yoghourt | − | − | − | − |
| Lactobacillus delbrueckii lactis | |||||
| DSM 20072T, 1 | Emmental cheese | − | − | − | − |
| Streptococcus thermophilus | |||||
| DSM 20617T, 1 | Pasteurized milk | − | − | − | − |
| Lactobacillus crispatus | |||||
| DSM 20584T, 1 | Eye | − | − | − | − |
| Lactobacillus casei | |||||
| FAM 181211 | Gruyére PDO cheese | − | − | − | − |
| Lactobacillus rhamnosus | |||||
| CCUG 342911 | Human feces | − | − | − | − |
| Lactobacillus fermentum | |||||
| DSM 20052T, 1 | Fermented beets | − | − | − | − |
| Lactobacillus paracasei paracasei | |||||
| DSM 5622T, 1 | Milk products | − | − | − | − |
| Lactobacillus acidophilus | |||||
| DSM 20079T, 1 | Human | − | − | − | − |
| Lactobacillus johnsonii | |||||
| DSM 10533T, 1 | Human blood | − | − | − | − |
| Lactobacillus amylovorus | |||||
| DSM 20531T, 1 | Cattle waste corn fermentation | − | − | − | − |
PCR results are indicated with + if an amplicon was observed, and with − if no amplicon was observed, after PCR.
T
Type strain.
1
Strains were from the Agroscope Culture Collection (Switzerland) (FAM); the German Collection of Microorganisms and Cell Cultures (DSM); the Belgian Coordinated Collections of Microorganisms (LMG); and the Culture Collection University of Göteborg (Sweden) (CCUG); DVS, Direct Vat Set culture from Chr. Hansen Holding A/S, Denmark.
#
+ and − indicate presence (+) or absence (−) of an amplicon using the L. gallinarum PCR.