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. 2017 Jul 19;3(1):vex017. doi: 10.1093/ve/vex017

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© The Author 2017. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 5. — Summary of recombinant regions identified in (A) TTLwV-1 (light green bars) and (B) TTLwV-2 (dark green bars). Recombination breakpoint distribution plots for (C) TTLwV-1 and (D) TTLwV-2, with breakpoint hot-spots indicated in red and cold-spots in blue. The dark and light grey areas of the plots indicate 95% and 99% confidence intervals, respectively. Detectable breakpoint positions are indicated by vertical lines at the top of the graphs. The thick black line represents the plot of the number of breakpoints detected within the 200-nt window region (window was moved along each of the represented alignments 1 nt at a time).