Table 1. Identification of WRKY genes in potato.
| NAME | Gene locus | chromosome Location | WRKY domain | Group | PI | Mw (KD) | Protein length(aa) | CDS length(bp) | Extron | ||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Conserved heptapeptide | Zinc-finger type | Domain number | |||||||||
| StWRKY01 | PGSC0003DMG400011457 | chr01 | WRKYGQK | C2H2 | 1 | IIc | 4.97 | 37.28 | 339 | 1020 | 3 |
| StWRKY02 | PGSC0003DMG400009014 | chr01 | WRKYGQK | C2H2 | 1 | IIe | 5.2 | 27.22 | 244 | 735 | 3 |
| StWRKY03 | PGSC0003DMG400009051 | chr01 | WRKYGQK | C2H2 | 1 | IIc | 6.07 | 35.88 | 317 | 954 | 3 |
| StWRKY04 | PGSC0003DMG400031175 | chr01 | WRKYGQK | C2H2 | 1 | IIc | 8.16 | 27.50 | 251 | 756 | 4 |
| StWRKY05 | PGSC0003DMG400000064 | chr01 | WRKYGQK | C2H2 | 1 | IIe | 5.73 | 38.83 | 352 | 1059 | 3 |
| StWRKY06 | PGSC0003DMG400000211 | chr01 | WRKYGQK | C2HC | 1 | III | 5.64 | 38.87 | 346 | 1041 | 3 |
| StWRKY07 | PGSC0003DMG400029779 | chr01 | WRKYGQK | C2H2 | 1 | IIb | 8.14 | 45.94 | 413 | 1242 | 4 |
| StWRKY08 | PGSC0003DMG400015104 | chr02 | WRKYGQK | C2H2 | 1 | IIe | 5.16 | 46.16 | 413 | 1242 | 3 |
| StWRKY09 | PGSC0003DMG400022063 | chr02 | WRKYGQK | C2H2 | 1 | IIb | 7.02 | 55.21 | 496 | 1491 | 5 |
| StWRKY10 | PGSC0003DMG400025481 | chr02 | WRKYGQK | C2H2 | 1 | IId | 9.12 | 37.38 | 334 | 1005 | 3 |
| StWRKY11 | PGSC0003DMG402006935 | chr02 | WRKYGQK | C2H2 | 1 | IIb | 6.29 | 48.68 | 443 | 1332 | 3 |
| StWRKY12 | PGSC0003DMG400009703 | chr02 | WRKYGQK | C2H2 | 1 | IIc | 6.49 | 36.17 | 318 | 957 | 3 |
| StWRKY13 | PGSC0003DMG400028469 | chr02 | WRKYGQK | C2H2 | 1 | IIe | 5.94 | 33.57 | 299 | 900 | 3 |
| StWRKY14 | PGSC0003DMG400016441 | chr02 | WRKYGQK | C2H2 | 1 | IIb | 6.98 | 60.06 | 553 | 1662 | 6 |
| StWRKY15 | PGSC0003DMG400024961 | chr02 | WRKYGQK | C2H2 | 1 | IId | 9.70 | 36.01 | 324 | 975 | 3 |
| StWRKY16 | PGSC0003DMG400001434 | chr02 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.13 | 50.16 | 451 | 1356 | 4 |
| StWRKY17 | PGSC0003DMG400020206 | chr02 | WRKYGQK | C2H2 | 1 | IIc | 9.52 | 16.45 | 141 | 426 | 2 |
| StWRKY18 | PGSC0003DMG401005575 | chr03 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.56 | 57.08 | 516 | 1551 | 4 |
| StWRKY19 | PGSC0003DMG400020608 | chr03 | WRKYGQK | C2HC | 1 | III | 6.17 | 31.89 | 277 | 834 | 3 |
| StWRKY20 | PGSC0003DMG400041197 | chr03 | WRKYGQK | C2H2 | 1 | IIe | 8.46 | 28.69 | 249 | 750 | 3 |
| StWRKY21 | PGSC0003DMG400039175 | chr03 | WRKCGQK* | C2H2 | 1 | IIe | 8.89 | 28.66 | 249 | 750 | 3 |
| StWRKY22 | PGSC0003DMG400009103 | chr03 | WRKYGQK | C2HC | 1 | III | 5.90 | 40.31 | 356 | 1071 | 3 |
| StWRKY23 | PGSC0003DMG400044842 | chr03 | WRKYGMK* | C2H2 | 1 | IIe | 6.06 | 29.51 | 259 | 780 | 1 |
| StWRKY24 | PGSC0003DMG400034476 | chr03 | WKKHGSN* | C2H2 | 1 | IIe | 7.06 | 19.99 | 173 | 552 | 1 |
| StWRKY25 | PGSC0003DMG400018081 | chr03 | WRKYGQK | C2H2 | 1 | IIb | 6.82 | 58.45 | 525 | 1578 | 5 |
| StWRKY26 | PGSC0003DMG400019824 | chr03 | WRKYGQK | C2H2 | 1 | IIa | 8.74 | 39.76 | 355 | 1068 | 5 |
| StWRKY27 | PGSC0003DMG400040494 | chr04 | WRKYGQK | C2H2 | 1 | IIe | 8.86 | 35.67 | 311 | 936 | 5 |
| StWRKY28 | PGSC0003DMG401031196 | chr04 | WRKYGKK* | C2H2 | 1 | IIc | 9.47 | 16.12 | 138 | 417 | 3 |
| StWRKY29 | PGSC0003DMG400019706 | chr04 | WRKYGQK | C2H2 | 1 | IIc | 9.00 | 27.26 | 234 | 705 | 3 |
| StWRKY30 | PGSC0003DMG400031140 | chr04 | WRKYGKK* | C2H2 | 1 | IIc | 6.55 | 26.68 | 231 | 696 | 3 |
| StWRKY31 | PGSC0003DMG400007947 | chr04 | WRKYGQK | C2H2 | 1 | IId | 9.67 | 38.88 | 354 | 1065 | 3 |
| StWRKY32 | PGSC0003DMG400028335 | chr05 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 8.05 | 55.46 | 508 | 1527 | 4 |
| StWRKY33 | PGSC0003DMG400028381 | chr05 | WRKYGQK | C2H2 | 1 | IIc | 5.34 | 35.28 | 326 | 981 | 3 |
| StWRKY34 | PGSC0003DMG400021895 | chr05 | WRKYGQK | C2H2 | 1 | IIc | 9.22 | 19.92 | 172 | 519 | 2 |
| StWRKY35 | PGSC0003DMG400036639 | chr05 | WRKYGQK | C2H2 | 1 | IIe | 9.53 | 37.44 | 330 | 993 | 3 |
| StWRKY36 | PGSC0003DMG400035855 | chr05 | WRKYGQK | C2H2 | 1 | IIe | 9.04 | 37.55 | 330 | 993 | 3 |
| StWRKY37 | PGSC0003DMG400033884 | chr05 | WRKYGQR* | C2HC | 1 | III | 6.25 | 32.92 | 294 | 885 | 3 |
| StWRKY38 | PGSC0003DMG401033880 | chr05 | WRKYGQK | C2HC | 1 | III | 5.83 | 37.37 | 331 | 996 | 3 |
| StWRKY39 | PGSC0003DMG400017990 | chr05 | WRKYGQK | C2HC | 1 | III | 5.48 | 34.06 | 301 | 906 | 3 |
| StWRKY40 | PGSC0003DMG400027208 | chr05 | WRKYGQK | C2H2 | 1 | IIc | 9.01 | 28.14 | 250 | 753 | 3 |
| StWRKY41 | PGSC0003DMG400023360 | chr05 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.84 | 51.90 | 457 | 1374 | 3 |
| StWRKY42 | PGSC0003DMG400005329 | chr06 | WRKYGQK | C2H2 | 1 | IId | 9.62 | 39.95 | 355 | 1068 | 3 |
| StWRKY43 | PGSC0003DMG400008776 | chr06 | WRKYGQK | C2HC | 1 | III | 5.94 | 38.15 | 347 | 1044 | 4 |
| StWRKY44 | PGSC0003DMG400027582 | chr06 | WRKYGQK | C2HC | 1 | III | 8.06 | 26.02 | 223 | 672 | 3 |
| StWRKY45 | PGSC0003DMG400016769 | chr06 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.90 | 59.57 | 534 | 1605 | 5 |
| StWRKY46 | PGSC0003DMG400028520 | chr06 | WRKYGQK | C2H2 | 1 | IIa | 8.37 | 39.79 | 360 | 1083 | 4 |
| StWRKY47 | PGSC0003DMG400006155 | chr07 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.55 | 46.54 | 422 | 1269 | 4 |
| StWRKY48 | PGSC0003DMG400015015 | chr07 | WRKYGQK | C2H2 | 1 | IIb | 6.09 | 60.26 | 557 | 1674 | 5 |
| StWRKY49 | PGSC0003DMG400020432 | chr07 | WRKYGQK | C2H2 | 1 | IIe | 5.51 | 28.19 | 256 | 771 | 4 |
| StWRKY50 | PGSC0003DMG400017349 | chr07 | WRKYGQK | C2H2 | 1 | IIc | 6.26 | 36.29 | 319 | 960 | 3 |
| StWRKY51 | PGSC0003DMG400022290 | chr07 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 7.05 | 64.91 | 596 | 1791 | 6 |
| StWRKY52 | PGSC0003DMG400022143 | chr07 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.01 | 81.04 | 748 | 2247 | 5 |
| StWRKY53 | PGSC0003DMG400009530 | chr08 | WRKYGQK | C2H2 | 1 | IId | 9.62 | 36.33 | 334 | 1005 | 3 |
| StWRKY54 | PGSC0003DMG400005835 | chr08 | WRKYGQK | C2HC | 1 | III | 5.69 | 40.74 | 360 | 1083 | 3 |
| StWRKY55 | PGSC0003DMG400005836 | chr08 | WRKYGQK | C2HC | 1 | III | 6.89 | 34.07 | 305 | 918 | 3 |
| StWRKY56 | PGSC0003DMG400008188 | chr08 | WRKYGKK* | C2H2 | 1 | IIc | 4.79 | 14.65 | 128 | 387 | 2 |
| StWRKY57 | PGSC0003DMG402007388 | chr08 | WRKYGQK | C2H2 | 1 | IIa | 8.84 | 28.72 | 253 | 762 | 4 |
| StWRKY58 | PGSC0003DMG400007387 | chr08 | WRKYGQK | C2H2 | 1 | IIa | 5.70 | 29.74 | 261 | 786 | 4 |
| StWRKY59 | PGSC0003DMG400012318 | chr08 | WRKYGQK | C2H2 | 1 | IIe | 5.57 | 35.04 | 307 | 924 | 3 |
| StWRKY60 | PGSC0003DMG400012317 | chr08 | WRKYGQK | C2H2 | 1 | IIc | 9.13 | 26.17 | 228 | 687 | 2 |
| StWRKY61 | PGSC0003DMG400012160 | chr08 | WRKYGQK | C2HC | 1 | III | 5.40 | 38.57 | 339 | 1020 | 3 |
| StWRKY62 | PGSC0003DMG400011633 | chr09 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 7.05 | 45.47 | 408 | 1227 | 4 |
| StWRKY63 | PGSC0003DMG400029207 | chr09 | WRKYGQK | C2HC | 1 | III | 5.63 | 33.46 | 293 | 882 | 3 |
| StWRKY64 | PGSC0003DMG400015076 | chr09 | WRKYGQK | C2H2 | 1 | IId | 9.65 | 39.10 | 346 | 1041 | 3 |
| StWRKY65 | PGSC0003DMG400011271 | chr10 | WIKYGEN/WRKYGQK | C2H2 | 2 | I | 5.07 | 75.77 | 697 | 2094 | 5 |
| StWRKY66 | PGSC0003DMG401010558 | chr10 | WRKYGQK | C2H2 | 1 | IIe | 8.36 | 23.24 | 208 | 627 | 3 |
| StWRKY67 | PGSC0003DMG400019884 | chr10 | WRKYGQK | C2HC | 1 | III | 5.55 | 33.52 | 290 | 873 | 3 |
| StWRKY68 | PGSC0003DMG400019408 | chr10 | WRKYGQK | C2H2 | 1 | IIe | 4.73 | 26.70 | 238 | 717 | 3 |
| StWRKY69 | PGSC0003DMG400008391 | chr10 | WRKYGQK | C2HC | 1 | III | 8.94 | 25.43 | 218 | 657 | 3 |
| StWRKY70 | PGSC0003DMG400010987 | chr10 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 9.51 | 52.05 | 467 | 1404 | 5 |
| StWRKY71 | PGSC0003DMG400007788 | chr12 | WRKYGKK* | C2H2 | 1 | IIc | 6.56 | 37.68 | 334 | 1005 | 3 |
| StWRKY72 | PGSC0003DMG400037700 | chr12 | WHKCGQK* | C2H2 | 1 | IIe | 8.11 | 37.51 | 331 | 996 | 3 |
| StWRKY73 | PGSC0003DMG402028822 | chr12 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.62 | 60.48 | 549 | 1650 | 4 |
| StWRKY74 | PGSC0003DMG400029815 | chr12 | WRKYGQK/WRKYGQK | C2H2 | 2 | I | 6.37 | 65.80 | 611 | 1836 | 6 |
| StWRKY75 | PGSC0003DMG400028633 | chr12 | WRKYGQK | C2H2 | 1 | IIa | 9.52 | 24.70 | 217 | 654 | 4 |
| StWRKY76 | PGSC0003DMG400023196 | chr12 | WRKYGKK* | C2H2 | 1 | IIc | 8.28 | 24.90 | 213 | 642 | 3 |
| StWRKY77 | PGSC0003DMG400016957 | chr12 | WRKYGKK* | C2H2 | 1 | IIc | 9.35 | 14.57 | 124 | 375 | 2 |
| StWRKY78 | PGSC0003DMG400029371 | chr12 | WRKYGQK | C2H2 | 1 | IId | 9.61 | 34.03 | 312 | 939 | 3 |
| StWRKY79 | PGSC0003DMG400033177 | chr00 | WRKYGKK* | C2H2 | 1 | IIc | 9.23 | 12.10 | 102 | 309 | 2 |
Notes:
* WRKY conserved sequence is WRKYGQK-like that is indicated by asterisk.
Chr00 means this sequence has not located.