Table 1.
Index SNPsa/most significantly associated SNPsb | Association in European ancestry | Association in African ancestry | Combined Meta | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNP | BP | Risk/Ref | Freq | OR | P-value | Freq | OR | P-value | Power | Freq | OR | P-value | Power | OR | P-value | P-het | r2 w/indexc | |||
2p23.3 | ||||||||||||||||||||
rs6746082a | 25659244 | A/C | 0.76 | 1.29 | 1.22×10−7 | 0.79 | 1.15 | 5.17×10−2 | 0.96 | 0.55 | 1.04 | 3.77×10−1 | 0.80 | 1.07 | 7.51×10−2 | 0.24 | ||||
rs6761076b | 25607758 | T/C | 0.81 | 1.23 | 7.23×10−3 | 0.68 | 1.09 | 8.33×10−2 | 1.14 | 3.19×10−3 | 0.22 | 0.05/0.51 | ||||||||
2q12.3 | ||||||||||||||||||||
rs12614346a | 107642482 | A/G | 0.33 | 1.39 | 1.70×10−5 | 0.31 | 1.00 | 9.45×10−1 | 0.99 | 0.16 | 1.00 | 9.81×10−1 | 0.99 | 1.00 | 9.74×10−1 | 0.95 | ||||
rs13416655b | 107621925 | C/T | 0.50 | 1.01 | 8.03×10−1 | 0.39 | 1.10 | 4.90×10−2 | 1.06 | 9.48×10−2 | 0.29 | 0.13/0.52 | ||||||||
3p22.1 | ||||||||||||||||||||
rs1052501a | 41925398 | G/A | 0.20 | 1.32 | 7.47×10−9 | 0.22 | 1.23 | 4.42×10−3 | 0.99 | 0.63 | 1.06 | 2.21×10−1 | 0.99 | 1.11 | 9.86×10−3 | 0.09 | ||||
rs143531651b | 41816589 | G/C | 0.17 | 1.25 | 4.91×10−3 | 0.11 | 1.27 | 1.37×10−3 | 1.26 | 2.02×10−5 | 0.91 | 0.02/0.79 | ||||||||
3q26.2 | ||||||||||||||||||||
rs10936599a | 169492101 | G/A | 0.75 | 1.26 | 1.74×10−13 | 0.79 | 1.12 | 8.41×10−2 | 0.92 | 0.93 | 1.08 | 3.84×10−1 | 0.73 | 1.11 | 5.65×10−2 | 0.75 | ||||
rs9811216b | 169487501 | T/C | 0.74 | 1.11 | 1.10×10−1 | 0.70 | 1.09 | 8.46×10−2 | 1.10 | 1.91×10−2 | 0.84 | 0.16/0.94 | ||||||||
6p21.33d | ||||||||||||||||||||
rs2285803a | 31107258 | A/G | 0.28 | 1.19 | 1.18×10−10 | 0.29 | 1.11 | 1.27×10−1 | 0.84 | 0.26 | 1.06 | 2.21×10−1 | 0.95 | − d | ||||||
7p15.3 | ||||||||||||||||||||
rs4487645a | 21938240 | C/A | 0.65 | 1.38 | 3.33×10−15 | 0.70 | 1.23 | 7.47×10−4 | 0.99 | 0.89 | 1.37 | 8.30×10−5 | 0.99 | 1.28 | 4.00×10−7 | 0.28 | ||||
rs12540021b | 21945563 | G/A | 0.75 | 1.24 | 6.30×10−4 | 0.89 | 1.43 | 2.27×10−5 | 1.31 | 1.27×10−7 | 0.19 | 0.71/0.67 | ||||||||
17p11.2 | ||||||||||||||||||||
rs4273077a | 16849139 | G/A | 0.11 | 1.26 | 1.41×10−7 | 0.12 | 1.37 | 2.46×10−4 | 0.83 | 0.14 | 1.17 | 1.60×10−2 | 0.97 | 1.24 | 3.66×10−5 | 0.14 | ||||
rs34562254b | 16842991 | A/G | 0.11 | 1.45 | 2.39×10−5 | 0.13 | 1.25 | 1.33×10−3 | 1.32 | 2.93×10−7 | 0.17 | 0.33/0.90 | ||||||||
22q13.1 | ||||||||||||||||||||
rs877529a | 39542292 | A/G | 0.44 | 1.23 | 2.29×10−16 | 0.45 | 1.21 | 4.31×10−4 | 0.97 | 0.48 | 1.11 | 1.47×10−2 | 0.99 | 1.15 | 4.31×10−5 | 0.21 | ||||
rs139425b | 39559742 | C/G | 0.46 | 1.21 | 4.43×10−4 | 0.71 | 1.21 | 5.54×10−4 | 1.21 | 8.41×10−7 | 0.93 | 0.18/0.95 |