Table 3.
Predicted protein secretion systems in F. columnare ATCC 49512 and 94-081.
| Secretion systems | Role in the system∗ | Genes | Number of genes available in F. columnare ATCC 49512 | Number of genes available in F. columnare 94-081 |
|---|---|---|---|---|
| T1SS | Mandatory | T1SS-abc | 6 | 6 |
| T1SS-mfp | 3 | 3 | ||
| T1SS-omf | 4 | 3 | ||
| T2SS | Mandatory | T2SS-gspJ | 1 | 0 |
| T3SS | Mandatory | T3SS-sctN | 2 | 2 |
| T4P | Mandatory | T4P-pilB | 1 | 1 |
| T4P-pilC | 1 | 1 | ||
| T4P-pilM | 2 | 1 | ||
| T4P-pilQ | 1 | 1 | ||
| T4SS | Mandatory | T4SS-t4cp2 | 1 | 0 |
| Accessory | T4SS-G-tfc18 | 0 | 1 | |
| T4SS-I-traP | 0 | 1 | ||
| T6SSi | Mandatory | T6SSi-tssH | 2 | 2 |
| T6SSiii | Mandatory | T6SSiii-tssB | 1 | 1 |
| T6SSiii-tssC | 1 | 1 | ||
| T6SSiii-tssD | 4 | 5 | ||
| T6SSiii-tssE | 1 | 1 | ||
| T6SSiii-tssF | 1 | 1 | ||
| T6SSiii-tssG | 1 | 1 | ||
| T6SSiii-tssH | 1 | 1 | ||
| T6SSiii-tssI | 3 | 6 | ||
| T6SSiii-tssK | 1 | 1 | ||
| T6SSiii-tssN | 1 | 1 | ||
| T6SSiii-tssP | 1 | 1 | ||
| T9SS | Mandatory | T9SS-gldK | 1 | 1 |
| T9SS-gldL | 1 | 1 | ||
| T9SS-gldM | 1 | 1 | ||
| T9SS-gldN | 1 | 1 | ||
| T9SS-sprA | 1 | 1 | ||
| T9SS-sprE | 1 | 1 | ||
| T9SS-sprT | 1 | 1 | ||
| Accessory | T9SS-porQ | 2 | 2 | |
| T9SS-porU | 1 | 1 | ||
| T9SS-porV | 1 | 1 | ||
| T9SS-gldJ | 1 | 1 |
∗Mandatory components are essential for system function. Accessory components are not essential for the system.