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. 2017 Jul 19;8:15959. doi: 10.1038/ncomms15959

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Copyright © 2017, The Author(s)

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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(a) Time evolution of the root mean squared deviation (r.m.s.d.) for hexamers and pentamers, and the moving average with a window size of 10 ns is shown in blue. (b) For all area and height calculations, the three principal moments of inertia of the entire capsid define the x, y and z axes. The cross-sectional area is estimated as the area of an ellipse where the major and minor axes are the maximal distance between parts of the capsid along the and axes. The height of the capsid is defined as the longest distance from the tip (bottom) to the base (top) along the axis. (c) Time evolution of the capsid’s cross-section, and the moving average with a 10 ns window size is shown in blue. (d) Time evolution of the height of the HIV-1 capsid; the moving average with a 10 ns window size is shown in blue.

Inline graphic — (a) Time evolution of the root mean squared deviation (r.m.s.d.) for hexamers and pentamers, and the moving average with a window size of 10 ns is shown in blue. (b) For all area and height calculations, the three principal moments of inertia of the entire capsid define the x, y and z axes. The cross-sectional area is estimated as the area of an ellipse where the major and minor axes are the maximal distance between parts of the capsid along the and axes. The height of the capsid is defined as the longest distance from the tip (bottom) to the base (top) along the axis. (c) Time evolution of the capsid’s cross-section, and the moving average with a 10 ns window size is shown in blue. (d) Time evolution of the height of the HIV-1 capsid; the moving average with a 10 ns window size is shown in blue.