Skip to main content
. Author manuscript; available in PMC: 2017 Jul 25.
Published in final edited form as: Biom J. 2015 Jun 8;57(5):867–884. doi: 10.1002/bimj.201400143

Table 1.

Simulation results with example 1, ρ = 0.4,θ = 2,n = 300. Median and robust standard deviations (in parentheses) of the MSE ratio between the penalized model and full model, and the estimated θ. Mean and standard deviations of sensitivity and specificity.

Method MSE Sensitivity Specificity θ̂
NB component
NB-LASSO 2.529 (1.434) 0.559 (0.427) 0.895 (0.123) 0.277 (0.067)
NB-MCP 3.514 (2.149) 0.713 (0.355) 0.869 (0.093) 0.309 (0.059)
NB-SCAD 3.434 (1.991) 0.644 (0.392) 0.854 (0.129) 0.304 (0.067)
ZINB-LASSO 0.243 (0.202) 0.862 (0.278) 0.924 (0.087) 2.229 (0.784)
ZINB-MCP 0.1 (0.133) 0.846 (0.243) 0.974 (0.048) 2.286 (0.868)
ZINB-SCAD 0.167 (0.214) 0.856 (0.239) 0.958 (0.056) 2.119 (0.881)
BE(0.1573) 0.614 (0.279) 0.956 (0.161) 0.748 (0.129) 3.138 (1.46)
BE(0.05) 0.404 (0.353) 0.918 (0.201) 0.879 (0.113) 2.666 (1.136)
BE(0.01) 0.177 (0.235) 0.824 (0.273) 0.968 (0.053) 2.207 (0.86)
ZINB-ORACLE 0.042 (0.042) 1 (0) 1 (0) 2.127 (0.759)

Zero component
ZINB-LASSO 0.381 (0.343) 0.614 (0.306) 0.973 (0.043)
ZINB-MCP 0.327 (0.282) 0.745 (0.201) 0.938 (0.09)
ZINB-SCAD 0.382 (0.316) 0.59 (0.234) 0.981 (0.036)
BE(0.1573) 0.607 (0.24) 0.83 (0.174) 0.788 (0.134)
BE(0.05) 0.406 (0.319) 0.731 (0.212) 0.922 (0.085)
BE(0.01) 0.403 (0.308) 0.58 (0.241) 0.987 (0.029)
ZINB-ORACLE 0.119 (0.091) 1 (0) 1 (0)