Table 2.

Comparison of ${\widehat{\lambda }}_{\alpha }$ between Lasso-Ayers, Lasso-PL, and Lasso-AL

Model	0 Null SNPs	45 Null SNPs	300 Null SNPs	900 Null SNPs	20,000 Null SNPs
Lasso-Ayers	0.112 (0.0168)	0.112 (0.0165)	0.108 (0.0099)	0.105 (0.0065)	0.074 (0.0031)
Lasso-PL	0.110 (0.0042)	0.110 (0.0041)	0.109 (0.0034)	0.105 (0.0033)	0.074 (0.0022)
Lasso-AL	0.108 (0.0033)	0.107 (0.0033)	0.107 (0.0033)	0.106 (0.0033)	0.081 (0.0039)

The average selected value of λ that controls the type-1-error rate at level α=0.01 is compared between three different methods across 300 simulated datasets. Standard deviations are reported in parentheses