Table 1.
Summary on genetic information of Kordia Single Amplified Genomes (SAGs) and closest SAGs, isolates and clones. Identity % against Kordia sp. CFSAG39SUR’s corresponding genes (16S, ITS and 23S) and proteins (RpoB and PR).
| Kordia sequence information | Origin | Depth (m) | 16S |
ITS |
23S |
rpoB |
PR |
|||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| # seq. | id % | # seq | id % | # seq | id % | # seq | id % | # seq | id % | |||
| CFSAG39SUR (98 SAGs) | North Indian Ocean | 5 | 78 | 100 | 78 | 100 | 78 | 100 | 18 | 100 | 34 | 100 |
| AAA242-P21 (1 SAG) | NPSG ALOHA | 4000 | 1 | 100 | – | – | – | – | – | – | – | – |
| AAA285 (17 SAGs) | NPSG ALOHA | 3800 | 1 | 100 | – | – | – | – | – | – | – | – |
| Kordia algicida OT-1 (1 isolate) | Masan Bay, S.Korea | 0 | 3 | 96.8 | 3 | 76.1 | 3 | 90.5 | 1 | 89.3 | 0 | – |
| Kordia sp. PC-4 (1 isolate) | Sagami Bay, Japan | 100 | 1 | 98.4 | – | – | – | – | – | – | 1 | 89.2 |
| Unc. Bact. PRTBB8540 (1 clone) | Puerto Rico Trench | 6000 | 1 | 99.9 | – | – | – | – | – | – | – | – |
For each gene and protein, “# seq” refers to the number of sequences available for comparison.