Skip to main content
. Author manuscript; available in PMC: 2017 Oct 1.
Published in final edited form as: Nat Protoc. 2017 Mar 23;12(4):828–863. doi: 10.1038/nprot.2017.016

Number of permutations: 1,000,000

Method to convert hairpins to genes: Kolmogorov-Smirnov

Gene rank order: Positive to negative for positive selection screens; negative to positive for negative selection screens

Select adjust gene scores to accommodate variation in hairpin set size

Select hairpins are pre-scored

Hairpin Id: WELL_ID

Convert hairpins to: GENE_ID