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. 2017 Jul 25;16:130. doi: 10.1186/s12934-017-0747-0

Table 1.

Bacterial strains, plasmids and oligonucleotides used in this study

Bacterial strains Genotype Source/reference
E. coli OmniMAX F′ {proAB lacIq lacZΔM15 Tn10(TetR) Δ(ccdAB)} mcrA Δ(mrr hsdRMS-mcrBC) Φ 80(lacZ)ΔM15 Δ(lacZYA-argF)U169 endA1 recA1 supE44 thi-1 gyrA96 relA1 tonpanD; used for cloning Invitrogen
B. subtilis 1012 leuA8 metB5 trpC2 hsrM1 [18]
Plasmids Description Source/references
pHCMC02-bgaB PlepA-bgaB, inducer-free expression plasmid [12]
pNDH33-bgaB Pgrac01-bgaB, inducible [3]
pLacI Expression of LacI, used with E. coli cloning strain Novagen
pHT01 Pgrac01, inducible [9]
pHT01-bgaB Pgrac01-bgaB, inducible [9]
pHT24 Pgrac01, Strep-tag II, inducible [9]
pHT10-gfp+ Pgrac01-gfp+, inducible [9]
pHT100 Pgrac100-bgaB, inducible [4]
pHT255 Pgrac100, inducible [4]
pHT1168 Pgrac100-gfp+, inducible [4]
pHT1650 Pgrac01-gfp+, ΔlacI, lacO1-lacO3 548 bp This study
pHT1651 Pgrac01-gfp+, ΔlacI, lacO1-lacO3 787 bp This study
pHT1653 Pgrac01-bgaB, ΔlacI, lacO1-lacO3 787 bp This study
pHT1654 Pgrac100-bgaB, ΔlacI, lacO1-lacO3 732 bp This study
pHT1655 Pgrac01-bgaB, ΔlacI, lacO1-lacO3 143 bp This study
pHT1656 Pgrac100-bgaB, ΔlacI, lacO1-lacO3 88 bp This study
pHT1657 Basic plasmid, used to construct pHT1655 This study
pHT1658 Basic plasmid, used to construct pHT1656, pHT1681, pHT1682 This stuy
pHT1660 Pgrac01-bgaB, ΔlacI, lacO1-lacO3 548 bp This study
pHT1661 Basic plasmid, used to construct pHT1660 This study
pHT1674 Pgrac100-bgaB, ΔlacI, lacO1-lacO3 493 bp This study
pHT1695 Pgrac100-gfp+, ΔlacI, lacO1-lacO3 493 bp This study
pHT1696 Pgrac100-gfp+, ΔlacI, lacO1-lacO3 732 bp This study
pHT2071 Pgrac01-bgaB, ΔlacI, lacO1-lacO3 280 bp This study
pHT2079 Pgrac100-bgaB, ΔlacI, lacO1-lacO3 255 bp This study
Oligonucleotide Sequence 5′→3′ Used for
ON224 CCGGATGACGTCGAATTCTAAACCTTCCCGGCTTCATCATG pHT1655, pHT1660, pHT1656
ON925 GAATTAGCTTGGTACCAAAGGAGGTAAGGATCACTAG To amplify promoter Pgrac100 to construct pHT1674
ON926B GACGTCGACTCTAGACATGGATCCTTCCTCCTTTAATTGG To amplify promoter Pgrac100 to construct pHT1674
ON941 AAAGGAGGAAGGATCCATGAATGTGTTATC pHT1655, pHT1660, pHT1656
ON985 CAATTGCGTTGCGCTCACTGCCGGTAC pHT1657, pHT1658
ON986 CGGCAGTGAGCGCAACGCAATTGAGCT pHT1657
ON1975 CAATTGCGTTGCGCTCACTGCCAGCGCT To create lacO3 in pHT2071
ON1976 AGCGCTGGCAGTGAGCGCAACGCAATTGAGCT

Pgrac01 (another name is Pgrac) and Pgrac100 are the name of two different promoters