Table 2.

The significant GO terms for the genes found to be differentially expressed between treatmentA (wt) and treatmentB (ko) their corresponding annotation for Biological Function (BF).

GO.ID	Term	Annotated	Significant	Expected
GO:0015031	protein transport	1142	7	11.13
GO:0051301	cell division	435	6	4.24
GO:0006886	intracellular protein transport	653	5	6.36
GO:0046777	protein autophosphorylation	170	0	1.66
GO:0006915	apoptotic process	1336	29	13.02
GO:0007067	mitosis	306	3	2.98
GO:0006397	mRNA processing	322	2	3.14
GO:0008285	negative regulation of cell proliferation	451	5	4.39
GO:0001701	in utero embryonic development	374	3	3.64
GO:0043065	positive regulation of apoptotic process	295	10	2.87
GO:0000122	negative regulation of transcription from RNA polymerase II promoter	534	5	5.2
GO:0006281	DNA repair	357	0	3.48
GO:0043066	negative regulation of apoptotic process	499	16	4.86
GO:0045944	positive regulation of transcription from RNA polymerase II promoter	715	12	6.97
GO:0009968	negative regulation of signal transduction	692	10	6.74
GO:0045893	positive regulation of transcription, DNA-dependent	991	15	9.66
GO:0007049	cell cycle	1135	10	11.06
GO:0001666	response to hypoxia	225	11	2.19
GO:0006355	regulation of transcription, DNA-dependent	2844	31	27.71
GO:0006468	protein phosphorylation	1156	17	11.26

Annotated: Number of genes associated to the GO term, Significant: Number of significantly differentially expressed (p <= 0.05) genes within the annotated genes, Expected: Number of genes within the annotated genes that are expected to be significantly deferentially expressed (p < = 0.05) by random.