Table 1.
Tumor type | Total number of tumors | FAM83A | FAM83B | FAM83C | FAM83D | FAM83E | FAM83F | FAM83G | FAM83H | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gain | Loss | Mutation | Gain | Loss | Mutation | Gain | Loss | Mutation | Gain | Loss | Mutation | Gain | Loss | Mutation | Gain | Loss | Mutation | Gain | Loss | Mutation | Gain | Loss | Mutation | ||
acc | 75 | 34 | 10 | 0 | 14 | 12 | 1 | 43 | 2 | 1 | 42 | 2 | 0 | 44 | 5 | 1 | 2 | 39 | 0 | 3 | 23 | 0 | 33 | 11 | 5 |
blca | 126 | 71 | 7 | 0 | 30 | 27 | 2 | 86 | 1 | 3 | 86 | 2 | 2 | 53 | 15 | 2 | 23 | 52 | 1 | 31 | 49 | 4 | 68 | 8 | 6 |
brca | 960 | 593 | 31 | 3 | 221 | 148 | 5 | 419 | 49 | 2 | 404 | 56 | 0 | 206 | 177 | 2 | 95 | 436 | 3 | 100 | 495 | 3 | 555 | 61 | 2 |
cesc | 190 | 68 | 15 | 0 | 36 | 29 | 3 | 83 | 2 | 1 | 77 | 5 | 1 | 52 | 20 | 1 | 27 | 44 | 0 | 15 | 52 | 3 | 70 | 15 | 1 |
chol | 35 | 15 | 1 | 0 | 8 | 5 | 0 | 13 | 2 | 0 | 13 | 2 | 0 | 6 | 5 | 0 | 6 | 5 | 0 | 5 | 9 | 0 | 15 | 1 | 0 |
coadread | 195 | 99 | 4 | 3 | 28 | 8 | 4 | 144 | 0 | 5 | 144 | 0 | 4 | 33 | 6 | 0 | 2 | 48 | 0 | 2 | 96 | 2 | 96 | 7 | 1 |
gbm | 136 | 18 | 12 | 0 | 6 | 25 | 3 | 51 | 3 | 0 | 51 | 3 | 1 | 32 | 25 | 0 | 10 | 58 | 0 | 14 | 16 | 0 | 20 | 11 | 2 |
hnsc | 279 | 203 | 2 | 0 | 55 | 38 | 4 | 124 | 12 | 4 | 114 | 17 | 0 | 40 | 54 | 1 | 66 | 41 | 0 | 41 | 53 | 5 | 200 | 4 | 5 |
kirc | 413 | 65 | 40 | 2 | 11 | 71 | 6 | 99 | 0 | 2 | 99 | 0 | 1 | 42 | 4 | 0 | 31 | 34 | 0 | 18 | 30 | 3 | 66 | 40 | 1 |
laml | 163 | 20 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 3 | 0 | 5 | 3 | 0 | 9 | 2 | 0 | 0 | 14 | 0 | 20 | 0 | 0 |
lgg | 283 | 57 | 6 | 1 | 8 | 18 | 4 | 26 | 1 | 0 | 26 | 1 | 0 | 13 | 137 | 0 | 10 | 36 | 0 | 9 | 16 | 1 | 53 | 17 | 1 |
lihc | 190 | 110 | 10 | 0 | 70 | 7 | 2 | 62 | 7 | 2 | 63 | 6 | 1 | 47 | 24 | 2 | 32 | 53 | 0 | 30 | 75 | 0 | 108 | 10 | 4 |
luad | 230 | 139 | 13 | 3 | 79 | 32 | 11 | 100 | 23 | 5 | 89 | 32 | 4 | 28 | 82 | 0 | 31 | 97 | 1 | 40 | 94 | 3 | 129 | 19 | 6 |
lusc | 178 | 124 | 6 | 1 | 57 | 28 | 8 | 96 | 13 | 4 | 93 | 18 | 5 | 65 | 43 | 2 | 85 | 34 | 0 | 22 | 103 | 1 | 121 | 3 | 2 |
ov | 182 | 140 | 10 | 0 | 55 | 49 | 0 | 103 | 3 | 0 | 95 | 14 | 2 | 36 | 86 | 0 | 13 | 146 | 0 | 6 | 159 | 1 | 145 | 13 | 0 |
paad | 145 | 59 | 5 | 1 | 9 | 47 | 1 | 32 | 4 | 1 | 33 | 4 | 1 | 25 | 17 | 0 | 11 | 39 | 0 | 7 | 62 | 2 | 56 | 4 | 2 |
prad | 332 | 94 | 2 | 1 | 8 | 25 | 6 | 18 | 11 | 1 | 17 | 11 | 0 | 7 | 23 | 0 | 2 | 37 | 2 | 18 | 37 | 1 | 89 | 4 | 0 |
skcm | 278 | 139 | 15 | 12 | 112 | 44 | 54 | 137 | 6 | 16 | 140 | 4 | 6 | 44 | 61 | 10 | 111 | 26 | 9 | 35 | 91 | 5 | 142 | 19 | 11 |
thca | 397 | 7 | 3 | 1 | 1 | 3 | 1 | 11 | 0 | 0 | 11 | 0 | 1 | 7 | 1 | 0 | 3 | 67 | 1 | 15 | 5 | 0 | 7 | 4 | 1 |