Table 3.
GO terms significantly enriched (A) for the 53 genes that were common for the 3 different SAM analysis performed and (B) for the 124 genes that where overlapping in the Multiclass analysis and ER and TP53 analysis.
| Category | Term | Count | p‐value | Fold Enrichment |
|---|---|---|---|---|
| A | ||||
| GOTERM_BP_ALL | GO:0007275∼multicellular organismal development | 31 | 0.005 | 1.46 |
| GOTERM_BP_ALL | GO:0032502∼developmental process | 36 | 0.007 | 1.34 |
| GOTERM_BP_ALL | GO:0032501∼multicellular organismal process | 34 | 0.014 | 1.32 |
| GOTERM_BP_ALL | GO:0030154∼cell differentiation | 25 | 0.021 | 1.45 |
| GOTERM_BP_ALL | GO:0051179∼localization | 20 | 0.029 | 1.54 |
| GOTERM_BP_ALL | GO:0048731∼system development | 25 | 0.046 | 1.36 |
| B | ||||
| GOTERM_BP_ALL | GO:0032502∼developmental process | 72 | 0.005 | 1.22 |
| GOTERM_BP_ALL | GO:0007275∼multicellular organismal development | 58 | 0.014 | 1.25 |
| GOTERM_CC_ALL | GO:0044420∼extracellular matrix part | 7 | 0.017 | 3.06 |
| GOTERM_MF_ALL | GO:0003700∼transcription factor activity | 20 | 0.020 | 1.65 |
| GOTERM_MF_ALL | GO:0043565∼sequence‐specific DNA binding | 14 | 0.022 | 1.89 |
| GOTERM_BP_ALL | GO:0001501∼skeletal development | 13 | 0.031 | 1.87 |
| GOTERM_BP_ALL | GO:0032501∼multicellular organismal process | 66 | 0.032 | 1.17 |
| GOTERM_CC_ALL | GO:0005581∼collagen | 4 | 0.034 | 4.95 |
| GOTERM_BP_ALL | GO:0030154∼cell differentiation | 47 | 0.036 | 1.25 |
| GOTERM_CC_ALL | GO:0031012∼extracellular matrix | 13 | 0.043 | 1.79 |