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RNA atoms with > 10% Mg2+ occupancy in any run. Stem residues are shown in blue, SLI loop residues are shown in green, and SLV loop residues are shown in yellow. Values represent the average over all 10 runs and error bars represent SD. Fig. S8 shows the average fraction occupancy between the first microsecond and second microsecond of simulation. To see this figure in color, go online.
