Table 3.
Comparisons of the expression levels of representative differentially expressed genes involved in auxin metabolism. ‘ND’ represents not detected
| Gene ID | Z WL vs Control | P WL vs Control | Functional annotation | ||
|---|---|---|---|---|---|
| Log2FC | FDR | Log2FC | FDR | ||
| Csa3G198490 | ND | ND | 1.84 | 2.45 E-03 | Indole-3-acetic acid-amido synthetase GH3.1 |
| Csa4G007100 | 2.53 | 1.07E-11 | 1.33 | 1.63 E-03 | Indole-3-acetic acid-amido synthetase GH3.7 |
| Csa6G493310 | 2.79 | 1.86E-08 | ND | ND | indole-3-acetic acid-amido synthetase GH3.1 |
| Csa1G025070 | −1.24 | 7.86 E-06 | −1.46 | 5.93E-08 | Auxin efflux carrier component 1 |
| Csa1G042820 | −1.21 | 3.22 E-06 | −1.05 | 3.58E-05 | Auxin efflux carrier component 1 |
| Csa4G430820 | 1.57 | 7.53 E-04 | ND | ND | Auxin efflux carrier component 1c |
| Csa5G576590 | ND | ND | −1.46 | 4.09E-08 | Auxin efflux carrier component 3 |
| Csa1G051690 | 1.99 | 4.17 E-03 | ND | ND | Indole-3-acetic acid-induced protein ARG7 |
| Csa5G534970 | ND | ND | −1.89 | 9.77 E-04 | Indole-3-acetic acid-induced protein ARG5 |
| Csa6G452710 | 6.07 | 2.51 E-08 | 5.07 | 2.38E-17 | Indole-3-acetic acid-induced protein ARG7 |
| Csa1G207820 | −1.51 | 4.6 E-05 | −1.17 | 9.23E-05 | Auxin-responsive protein IAA13 |
| Csa1G397130 | ND | ND | 3.18 | 9.69E-06 | Auxin-responsive protein IAA16 |
| Csa2G059200 | ND | ND | 1.75 | 2.85 E-04 | Auxin-responsive protein IAA33 |
| Csa2G170820 | ND | ND | −1.79 | 1.11E-11 | Auxin-responsive protein IAA13 |
| Csa2G200420 | −1.42 | 7.4 E-03 | ND | ND | Auxin-responsive protein |
| Csa3G134550 | ND | ND | −1.25 | 4.61E-05 | Auxin-responsive protein IAA13 |
| Csa3G143580 | −1.09 | 3.23 E-03 | ND | ND | Auxin-responsive protein IAA4 |
| Csa3G877650 | −1.22 | 7.92E-04 | ND | ND | Auxin-responsive protein IAA29 |
| Csa6G497220 | 1.11 | 1.13 E-04 | ND | ND | Auxin-responsive protein IAA9 |
| Csa2G258720 | −2.56 | 4.09 E-03 | ND | ND | Auxin-induced protein 6B |
| Csa2G258760 | 2.62 | 7.53 E-05 | ND | ND | Auxin-induced protein X10A |
| Csa2G379350 | ND | ND | −1.85 | 4.50 E-06 | Indole-3-pyruvate monooxygenase YUCCA4 |
| Csa3G118740 | −1.09 | 2.65 E-05 | −1.42 | 8.34E-08 | Auxin-induced protein X15 |
| Csa3G171820 | −1.03 | 1.83 E-03 | ND | ND | Auxin-induced protein |
| Csa3G821040 | ND | ND | 3.89 | 3.09E-06 | Auxin-regulated gene |
| Csa3G866530 | ND | ND | 2.64 | 2.66 E-04 | Auxin-induced protein 6B |
| Csa3G883020 | ND | ND | 2.34 | 1.07 E-04 | Auxin-induced protein 6B |
| Csa4G308640 | ND | ND | −1.20 | 3.00E-06 | Auxin transporter-like protein 4 |
| Csa4G433470 | ND | ND | 3.85 | 1.35E-06 | Auxin-regulated gene I |
| Csa4G556180 | −1.55 | 5.03 E-04 | −2.02 | 3.41E-09 | Auxin-induced protein 6B OS |
| Csa5G623890 | ND | ND | 1.52 | 1.10 E-04 | Auxin-regulated gene |
| Csa6G092560 | 2.32 | 1.22E-10 | 2.08 | 1.54E-16 | Auxin-induced protein 15A |
| Csa6G291920 | −1.11 | 3.99 E-06 | −1.10 | 1.72E-05 | Auxin response factor 4 |
| Csa6G518000 | −1.44 | 3.09 E-03 | ND | ND | Auxin-repressed 12.5 kDa protein |
| Csa6G518210 | −1.07 | 1.81 E-05 | −1.07 | 6.00E-05 | Auxin response factor 3 |
| Csa7G008430 | 1.19 | 4.21 E-04 | ND | ND | Auxin-induced protein 15A |
| Csa7G009020 | −2.40 | 4.67 E-05 | ND | ND | Auxin-induced protein X10A |
| Csa7G009150 | 2.50 | 1.39 E-05 | 2.54 | 2.40 E-04 | Auxin-induced protein 10A5 |
| Csa7G010800 | ND | ND | −1.30 | 1.71E-06 | Auxin transporter-like protein 5 |
| Csa7G329330 | −1.20 | 5.00 E-06 | −1.33 | 2.39 E-03 | Auxin response factor 9 |
| Csa7G378520 | −1.34 | 2.39 E-03 | ND | ND | Auxin-induced protein AUX28 |
| Csa7G448680 | 2.92 | 6.39E-15 | 1.68 | 4.30E-05 | Auxin responsive protein |