Table 1.
Parameters for the analysis of scenarios
| Scenario | 60 k SNPs | Causative QTN | Weights GWAS | Causative variances |
|---|---|---|---|---|
| (a) | Yes | |||
| (b) | Yes | Yes | ||
| (c) | Yes | Yes | Yes | |
| (d) | Yes | Yes | Yes | |
| (e) | Yes | |||
| (f) | Yes | Top 10% | ||
| (g) | Yes | Top 10% | Yes | |
| (h) | Yes | Top 10% | Yes | |
| (i) | Yes | Yes |
‘60 k SNPs’ defines scenarios that included the simulated SNPs
‘Causative QTN’ defines scenarios that included all or the top 10% simulated causative variants
‘Weight GWAS’ defines scenarios that used weights from the iterative GWAS approach
‘Causative variance’ defines scenarios that used true simulated variance for QTL