Table S4.
The GO BP functional analysis of Module 3
| GO BP term | Count | P-value |
|---|---|---|
| GO:0090090~negative regulation of canonical Wnt signaling pathway | 5 | 8.56E–09 |
| GO:0006521~regulation of cellular amino acid metabolic process | 4 | 1.05E–07 |
| GO:0002479~antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent | 4 | 2.01E–07 |
| GO:0038061~NIK/NF-kappaB signaling | 4 | 2.31E–07 |
| GO:0051436~negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | 4 | 2.89E–07 |
| GO:0051437~positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition | 4 | 3.55E–07 |
| GO:0031145~anaphase-promoting complex-dependent catabolic process | 4 | 4.00E–07 |
| GO:0060071~Wnt signaling pathway, planar cell polarity pathway | 4 | 6.34E–07 |
| GO:0043488~regulation of mRNA stability | 4 | 8.93E–07 |
| GO:0002223~stimulatory C-type lectin receptor signaling pathway | 4 | 9.46E–07 |
| GO:0033209~tumor necrosis factor-mediated signaling pathway | 4 | 1.35E–06 |
| GO:0090263~positive regulation of canonical Wnt signaling pathway | 4 | 1.42E–06 |
| GO:0050852~T-cell receptor signaling pathway | 4 | 2.67E–06 |
| GO:0038095~Fc-epsilon receptor signaling pathway | 4 | 4.65E–06 |
| GO:0000209~protein polyubiquitination | 4 | 5.14E–06 |
| GO:0043161~proteasome-mediated ubiquitin-dependent protein catabolic process | 4 | 6.90E–06 |
| GO:0000165~MAPK cascade | 4 | 1.48E–05 |
Note: Count refers to the number of DEGs enriched in the GO BP term.
Abbreviations: BP, biological process; DEGs, differentially expressed genes; GO, Gene Ontology; MAPK, mitogen-activated protein kinase; MHC, major histocompatibility complex; NF-kappaB, nuclear factor-kappaB; NIK, nuclear factor-kappaB-inducing kinase; TAP, transporter associated with antigen processing.