Table 2. Promoter motifs identified upstream of induced genes, using three different programs.
Program | Consensus motif | International Union of Pure and Applied Chemistry |
---|---|---|
meme | CGCCCCACCCCGCCC | |
ACATATCTTACTACA | ||
TATCAACAGCA | ||
CCCATGCA | ||
ATTATATGACA | ||
mdscan | CCCCCGCCCC | CCCSCGCCCC |
GGGCGCGGGG | GGGCGSGGGS | |
CGCCCGCGCC | CSBCCGCGSC | |
TTCCAAGCCC | YYCCAAGCCC | |
ATAGATATCA | ATASATATMA | |
650-bp region | TTCGGGAATACTC | |
TAGAGCCAACGAG | ||
GATTTTCCACGAT | ||
ACTTTTAAAGCTA | ||
GACGCTTCGAGAA |