Skip to main content
. 2005 Feb 28;102(10):3703–3707. doi: 10.1073/pnas.0408358102

Table 2. Promoter motifs identified upstream of induced genes, using three different programs.

Program Consensus motif International Union of Pure and Applied Chemistry
meme CGCCCCACCCCGCCC
ACATATCTTACTACA
TATCAACAGCA
CCCATGCA
ATTATATGACA
mdscan CCCCCGCCCC CCCSCGCCCC
GGGCGCGGGG GGGCGSGGGS
CGCCCGCGCC CSBCCGCGSC
TTCCAAGCCC YYCCAAGCCC
ATAGATATCA ATASATATMA
650-bp region TTCGGGAATACTC
TAGAGCCAACGAG
GATTTTCCACGAT
ACTTTTAAAGCTA
GACGCTTCGAGAA